KEGG   Mus pahari (shrew mouse): 110334887
Entry
110334887         CDS       T05929                                 
Symbol
Rnf139
Name
(RefSeq) E3 ubiquitin-protein ligase RNF139
  KO
K15703  E3 ubiquitin-protein ligase RNF139 [EC:2.3.2.27]
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpah04121]
    110334887 (Rnf139)
Enzymes [BR:mpah01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110334887 (Rnf139)
Ubiquitin system [BR:mpah04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110334887 (Rnf139)
SSDB
Motif
Pfam: TRC8_N zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_11 zf-RING_UBOX
Other DBs
NCBI-GeneID: 110334887
NCBI-ProteinID: XP_021072553
Ensembl: MGP_PahariEiJ_G0019830
Position
17:24702042..24713968
AA seq 667 aa
MAAVGPPQQQVRMAQQQVWAALEVALRVPCLYIIDAIFNSYYDSSQSRFCIGLQIFLRLL
GIVVSSIVLILSQRSLFKFYMYSSAFLLAATSVLVNYYAALHIDFYGAYNTSAFGIELLP
RKGPSLWMALIVLQLTFGIGYVTLLQIQSIYSQLMILNILVPIMGLITELPLHIRETLVL
MSSLILIFNTVLVLVVKLKWFYYSTRYVYLLVRHMYRIYGLQLLMEDTWKRIRFPDILRV
FWLTRITAQATVLMYILRMANETESFFISWDDFWDVICNLIISGCDSTLTVLGMSAVISS
IAHYLGLGILAFIGSNEEDDRRLGFVAPVLFFILALQTGLSGLRPEERLIRLSRNMCLLL
TAVLHFIHGMTDPVLMSLSASHVSSFHRHFPVLFVSACLFILPVFLSYVLWHHYALNTWL
FAVTAFCVELCLKVIVSLTVYTLFMIDGYYNVLWEKLDDYVYFVRSTGNIIEFIFGVVMF
GNGAYTMMFESGSKIRACMMCLHAYFNIYLQVKNGWKTFMNRRTAVKKINSLPEIKGTHL
QEIDDVCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVYIEDEIKDNSN
VSNNNGFIAPNENPNPEEALREDAAGSDRELNEDDSTDCDDDVQRERNGGIQHTGAAAAA
EFNDDTD
NT seq 2004 nt   +upstreamnt  +downstreamnt
atggcggcggtggggcccccgcagcagcaggtgcggatggcccagcagcaggtctgggcg
gcgctcgaagtggcgctccgggtgccctgcctctacatcatcgacgccatcttcaactcc
tactacgattccagccaaagccggttctgcatcgggcttcagatcttcctccggctcctc
ggtatagttgtatccagtattgttctgatcttgtcacagcgatcacttttcaagttttac
atgtacagctcagcctttctattagctgcaacttcagtgttggtgaattactatgctgct
ttgcacattgacttctatggtgcctacaacacgtcagcatttggaatcgagttgcttcct
cggaaagggccctcactgtggatggcactcatcgttctgcagctaacctttggaattgga
tatgtcacattactccagattcagtccatctattcacagttaatgattttgaatatcttg
gttcctataatgggcttaatcacagagctgccattacacatcagagagacattagtgctc
atgtcgtccttgattctcatatttaacacagtgcttgtcttggtggtaaaacttaagtgg
ttttactactctactaggtatgtttacttgttagtgaggcatatgtaccgaatttatgga
ttacagttactgatggaggacacatggaagaggattcgtttcccagacatacttcgggtc
ttctggctaacaagaattacagcccaggctacagtgttaatgtacattttaaggatggca
aatgaaactgagtccttctttatttcttgggatgacttctgggacgtcatttgtaatcta
ataattagtgggtgtgattctacactaactgtactaggcatgagtgctgtaatttcttca
atagcccattatttgggccttggaatactggcctttattggatcaaatgaagaagatgac
aggcggcttggctttgtagctcctgttttatttttcattttggctcttcagactggttta
agtgggctgagacctgaagagagacttattcgcttaagtagaaacatgtgccttttatta
actgcagtcctgcatttcatccatgggatgacagaccctgtattaatgtctctcagtgcc
tcccacgtgtcatctttccatagacacttccctgtgctgtttgtctctgcttgcctgttc
attctccctgtcttcctcagttacgtcctttggcatcactatgcactaaatacatggctg
tttgcagttacagccttctgtgtggaactctgcttgaaggtaatcgtctccctcactgtc
tacacgctgttcatgattgatggctactataacgtcctctgggaaaagcttgatgactat
gtctactttgttcgttccacaggcaatattatcgaatttatatttggagtagtaatgttt
gggaatggggcctataccatgatgtttgagtcaggaagtaaaattcgggcttgtatgatg
tgcctacatgcatattttaatatctacttacaagtaaaaaatggctggaagacattcatg
aatcgtagaactgctgttaagaaaattaattcacttcctgagataaaagggacccacttg
caagaaatagatgatgtctgtgcaatctgctatcatgagttcacaacatctgctcgcata
acaccgtgtaaccattatttccatgcactttgccttcggaaatggctgtacattcaagat
acttgtccaatgtgccatcagaaagtgtatatcgaagacgagatcaaggataactcaaat
gtatctaacaacaacgggtttattgcacccaatgaaaatccaaacccagaggaagcttta
agagaagatgctgctggatctgaccgagaactgaacgaggatgacagtacagactgtgat
gatgatgttcaaagagaaagaaacggggggattcagcacacaggcgcagcagcagcagca
gaatttaatgatgacactgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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