KEGG T05929: 110334966

Mus pahari (shrew mouse): 110334966

Entry

110334966         CDS       T05929

Symbol

Col22a1

Name

(RefSeq) collagen alpha-1(XXII) chain

K16630

collagen type XXII alpha

Organism

mpah Mus pahari (shrew mouse)

Pathway

mpah04974

Protein digestion and absorption

Brite

KEGG Orthology (KO) [BR:mpah00001]
09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    110334966 (Col22a1)

SSDB

Motif

Pfam:

Collagen VWA VWA_2 Laminin_G_3 Laminin_G_2

Other DBs

NCBI-GeneID:

110334966

NCBI-ProteinID:

XP_021072689

Ensembl:

MGP_PahariEiJ_G0019863

Position

17:complement(36957864..37190486)

AA seq 1613 aa
MPVSKSRRAMAVPRGNPLAYLLWILLLWGGDGGCQAQRAGCKSVQYDLVFLLDTSSSVGK
EDFEKVRQWVANLVDTFEVGPGHTRVGVVRYSDRPTTAFELGHFNSREEVKAAARRITYH
GGNTNTGDALRYITSRSFSAQAGGRPGNRAFKQVAILLTDGRSQDLVLDAAAAAHAAGIR
IFAVGVGAALKEELDEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGD
RFKHTNGGTKEITGFDLMDLFGVKEILGKRENGAQSSYVRLGSFPVVQRTEDVFPQGLPD
EYAFVTTFRFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVGAMKDAVRVVF
RGPRVDDLFDRDWHKMALSIQAQNVSLYIDCVLVQTLPIEERENIDIQGKTVIGKRLYDS
VPIDFDLQRIVIYCDSRHAELETCCDIPLGPCQVTVVTEPPPAPPQLPTPGSEQIGFLKT
INCSCPAGEKGERGFAGPLGLPGQKGDAGPIGLTGVPGPKGEKGDTGRGPFIHGEKGEKG
SLGPPGPPGRDGSKGMRGEPGELGEPGLPGEVGMKGPQGPPGLPGPAGQVGAPGLRGERG
ERGPPGEKGERGLDGFPGKPGETGEQGRPGPPGVAGLQGEKGDVGPAGPPGVPGSVVQRE
GLKGEQGAPGPRGHQGLPGPPGAPGLIGPEGRDGPPGPQGLRGKKGEVGPPGTPGALGPQ
GPPGPPGVPGPPGPGGPPGLPGELGFPGKPGPAGHAGTPGKDGLNGPPGLPGSKGEPGDP
GESGVPGIPGPRGEVGEQGLAGHPGEKGEVGLPGAPGFPGVRGEKGDQGEKGELGLPGLK
GAQGEKGEVGPAGPPGLPGSPSVFTPHPRMPGEQGPKGEKGDPGQPGAPGPQGHPGELGP
RGPTGPPGAKGHDGAQGPPGAAGNPGAPGPAGPPGLSGPPGSLGSPGVRGAPGKDGERGE
KGTAGEEGSPGPAGPRGDPGAPGLPGPPGKGKDGEPGLRGPPGLPGPLGTKGDRGTPGIP
GSPGSRGDPGIGVAGPPGPSGRPGDKGPPGSRGLPGFPGPPGPAGQDGAPGNPGERGPPG
KPGPSSLLSPEDINLLVKDVCNDCPAGPPGLPGLPGFKGDKGLPGKPGREGTEGKKGDTG
PPGLPGPPGVAGPQGSQGERGAEGEVGQKGEQGHPGVPGFMGPPGNPGPPGADGNAGAAG
PPGPQGPPGKEGPPGPQGPSGIPGIPGEEGKQGRDGKPGPPGDPGKTGEPGLSGAEGARG
PPGFKGNTGDPGPPGLRGEPGMAGPPGRDGSAGKDGDTGPAGPQGPRGTRGPPGSSGSPG
SPGDPGRPGAPGQKGSKGESGSPGLPGFLGPRGPPGEAGEIGAPGKEGAPGKPGEPGSKG
ERGDPGIKGDKGPPGGKGQPGDPGTPGHKGHTGLMGPQGQPGESGPPGPPGPPGQPGFPG
LRGESPSIDTLRRLIQEELGKQLEAKLAYLLAQMPSAHMKSSQGRPGPPGPPGKDGLPGR
AGPVGEPGRPGQGGLEGPSGPMGPKGERGAKGDPGTPGVGLRGEMGPPGIPGQPGEPGYA
KDGLPGSPGPQGETGPAGHPGPPGPPGPPGRCDPSHCAYFASLAARPSNVKGP

NT seq 4842 nt +upstreamnt +downstreamnt
atgcctgtctccaagagcaggcgagccatggctgtccccagagggaatcccttggcctac
cttctgtggattctactgctctggggaggagatggtggctgccaggcccagcgtgcaggc
tgcaaaagtgtgcagtatgatctggtcttcctcctggacacgtcttccagtgtgggcaag
gaggactttgagaaagtccgccagtgggtagccaacctggtagacacctttgaggtgggc
cctggccacacccgtgtgggggtagtgcgctacagtgaccggcccactacagcttttgaa
ctgggccacttcaactctcgcgaggaagtgaaggctgctgcgaggcgcatcacctaccat
ggtggtaacacgaacacgggtgatgccctgcgttatatcaccagccgtagcttctccgcc
caggcaggcggcagacctggaaatcgtgccttcaagcaggtggccatcctgttgactgat
ggccgtagccaggacctggtgctggatgctgcagcagctgcccatgcagccggcatccgc
atttttgctgttggtgtgggcgcagcattaaaggaggagctggatgagattgcttcagaa
cccaagtctgcgcatgtcttccatgtttccgacttcaatgccattgacaagatccgtggc
aagctgaggcgtcggctttgtgaaaatgtgctctgccctagtgtccgggtagaaggagat
cggtttaaacacaccaatggaggaaccaaggaaattacaggttttgacttgatggatttg
ttcggtgtgaaggaaatcttggggaagagagaaaacggagcccagagttcctatgtgcgg
ctgggttccttccctgtggtgcagagaactgaagatgtgtttccccagggtctgcctgat
gagtatgcctttgtcacgactttccggttccggaaaacatcacggaaagaagactggtac
atctggcaagtcattgaccagtatggcatcccacaggtctctatccggctggatggtgag
aacaaggcagttgagtacaacgctgtgggtgccatgaaggatgctgtccgggtggtcttc
cgaggcccccgagttgatgacctctttgaccgtgactggcacaagatggctctaagcatc
caggcccagaatgtgtccctctacattgactgtgtgctggttcagacactgcctattgag
gagagggagaacatcgacatccagggcaagactgtgattggcaaacgtctctatgacagc
gtgcccattgattttgacctgcagcggattgtgatttactgtgactcgagacatgcagaa
ctggagacttgctgtgacatcccattgggtccgtgtcaggtgacggtggtgacagagccg
ccacctgcgcctccacagctgcccacccccgggagcgaacagatcgggttcttgaagacc
atcaactgctcatgcccagctggagaaaagggtgagcggggctttgctggccctctggga
ctccctggacagaagggagatgcaggacccattggactaacgggtgttcctggacccaag
ggagaaaaaggagacactgggcgaggacccttcatccacggggaaaagggggagaaggga
tccctgggcccacctgggccccccggaagagacggcagcaaaggcatgagaggagagcca
ggagagctaggagagccggggctgcctggagaggtgggcatgaaggggccccagggacca
cctggactaccaggacctgctgggcaagttggagctccaggtcttcgaggagaacgaggt
gaaaggggacctccaggagaaaagggggagcgaggcctggatggattccctgggaagcct
ggagagactggagagcagggaagaccagggcctcctggtgtggcaggactgcagggagag
aagggagatgtggggcctgcaggaccccctggtgtgccaggctctgtggtgcagagagaa
ggcctgaagggagagcagggagcccctggaccaagaggtcatcaaggcctacctgggcct
ccaggagcacctggtttgattggtccagaaggcagagatggacccccagggcctcaaggt
ctccgagggaagaaaggtgaagtgggtcccccaggaacccctggagcgctggggccacag
ggcccacctggaccacccggtgttccagggccccctggacctggaggacccccgggctta
cctggcgagctcggcttcccgggaaaacctgggcccgctgggcacgcggggacaccagga
aaggatgggctgaatggaccaccaggccttcctggctccaagggagaaccaggggaccct
ggcgaaagtggcgtgcctggaataccaggacctcggggtgaagttggggagcagggcctt
gcaggtcatcctggtgagaagggagaagttggccttccaggtgctccgggcttcccagga
gtacgtggagagaaaggggaccagggagaaaaaggtgaactgggacttccgggtctgaaa
ggtgcccaaggagaaaagggcgaggttggtccagcaggtccccctggcttacctggaagt
ccatcagtgttcacaccacacccaagaatgccaggggaacaagggcctaaaggagaaaag
ggtgatcctggccagcctggcgccccgggaccacagggccatcctggagaattgggtcct
cggggacccactggacctccgggtgccaaggggcatgatggtgcacaaggacctcctgga
gcagctggaaaccctggtgctccaggacctgcaggaccccctggtctcagtggaccccca
ggaagtttgggttcccctggtgtcagaggcgcccctgggaaagacggggagcgtggagag
aagggaacagcaggggaagaaggcagcccagggcccgctggtccacggggagatcctggt
gctcctggcctcccagggccaccaggaaaggggaaggatggggagccgggactacgtgga
ccacctgggctacctggtcccttaggaactaagggtgaccgaggaacacctgggattcct
ggctctcctggcagccgtggtgacccaggcatcggggttgctggtcctcctggcccctca
ggacgaccaggagataaaggacccccgggatctcgaggtttacccggattccccggccca
ccgggaccagctggccaggatggtgcaccaggaaatccaggagaaagagggcctcctgga
aaaccaggcccttcttcactgctgtctccagaggacataaatctcttagtaaaggatgtg
tgcaacgactgccctgctggtcccccaggcctcccaggtctgccaggattcaaaggggac
aagggtcttccaggaaaaccagggagagaaggtacagaaggtaaaaagggagataccggg
cccccaggcctccctgggcctccaggagtagctggaccacagggaagccaaggagagcgt
ggtgcagagggtgaggtgggacagaaaggcgaacagggtcaccctggagttccaggcttc
atgggcccaccagggaatcctgggccaccaggagcagacggaaatgccggtgccgcaggg
ccaccaggacctcaagggcctccgggcaaagaaggccctcctggtccccaaggcccatct
ggcatcccaggaatcccaggggaagaaggcaagcagggcagagatggaaagccaggtccc
cctggagatccgggcaagacaggagagccaggcctatcaggagcagagggagccagaggt
ccaccgggcttcaaggggaacacaggtgatcctggcccccctggtctgaggggagaacct
ggcatggcagggccccctggaagggacggatcagcaggaaaagatggtgacactggacct
gctggaccacagggtcccagaggaacaaggggaccaccgggcagcagtggatcacctgga
tctccaggagaccctggccgtccaggagccccaggccaaaagggaagcaaaggagaaagt
ggcagcccaggacttccagggtttctgggtccccgtggacctccaggagaagcaggagag
ataggagctccaggaaaggagggtgctcctgggaagcctggagagccaggatccaaagga
gagaggggagaccctgggatcaaaggtgacaaaggaccaccaggtgggaagggtcagcct
ggagaccctggaaccccaggccacaagggtcatactggcctaatgggtccccaaggacaa
ccaggggagagtggccctcctgggcccccagggccacctggtcagccaggatttccagga
ctgcggggagagtctccatccatcgataccttacggcgcctcattcaggaagaacttggg
aaacagctagaagccaaactcgcctacctcctggcccagatgccttcagcacacatgaag
tcctctcaaggccgacctgggccccctggaccccctggaaaagatgggctgcctggccgg
gcaggccccgtgggtgagccaggccgtcctggccaaggcggtctggaaggaccctctgga
ccaatgggccccaaaggtgaaagaggagccaaaggtgaccctggcacacctggagttggt
ctccgaggagagatgggtccccccggaataccaggccaacctggggaacctggatacgct
aaagatggacttccaggaagccctggccctcaaggagagacaggaccagctggacatcct
ggccctcctggtcctcccggcccacctggccggtgtgacccctcccactgtgcgtatttt
gccagccttgctgcccggccaagtaatgtgaagggcccatag

All links

Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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