KEGG T05929: 110336896

Mus pahari (shrew mouse): 110336896

Entry

110336896         CDS       T05929

Symbol

Ushbp1

Name

(RefSeq) Usher syndrome type-1C protein-binding protein 1

K21881

Usher syndrome type-1C protein-binding protein 1

Organism

mpah Mus pahari (shrew mouse)

Brite

KEGG Orthology (KO) [BR:mpah00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mpah03037]
    110336896 (Ushbp1)
Cilium and associated proteins [BR:mpah03037]
Primary cilia and associated proteins
  USH complex and associated proteins
   110336896 (Ushbp1)

SSDB

Motif

Pfam:

USHBP1_PDZ-bd PRKG1_interact

Other DBs

NCBI-GeneID:

110336896

NCBI-ProteinID:

XP_021075293

Ensembl:

MGP_PahariEiJ_G0021646

Position

19:complement(86131421..86142947)

AA seq 677 aa
MSARATRPRSRRGRHPLPGELDPVAESSEEVDANNGRSETKPELLQEYLGPGLQGQRNWI
KEGCDVGSHAVLSSSPEEQCKPGVETHQVLQEAPLDTGPTEISVPNVYETLQCRLSSLEA
VVAALRHHSLNFPKTVEAENRAPGSSGDEKEASGPGQQEAARLIERNAWLRLALCNREDE
LACTQASLHDAQAEKETLQRKVQELEDSLMQLEASLPPPILRAGRRNSNSSSSGAERRPW
APQDSPMAHPFLQRLKSDSSTQSFGCLSTQHPVPETYLMEDQMRQLQGSIEKLKCFNRLL
LAVLQGYKGRCESLSIKLAKREAEATALCLALQYSEDCEEVYEVLLALKMAGLGTGVGTT
KVDLQAAEKEASRLLVKKEATMDVETPQPSSEGSGVDKPTPEELAAQLHGYVQHLRERWA
LVKIPEALGPVTVPKATMPHAEATVQAILEIQPGPALPQLEKSQIQQDLAATRDSLADLV
LRLQLTQREKRGLELREAALRAQGPAHQLLLQQLCWERAHLAGDGSSGGSSEDPSSEEEA
GEDRQQHYQGPPALLGGQMGKVWDSENVSQELSASLARATDLRAQLQSLRRQLEQVAHKG
RTRRVQSAELSRELCKAHSALALAFRGAHRKQEEQRRKLEQQVTWMQAQQAEELAVLTAT
ARALEKPGAPQPAQTFL

NT seq 2034 nt +upstreamnt +downstreamnt
atgagtgcccgggccacacggccccgaagccgtcgagggaggcatcctctgcctggggag
ctagaccctgtagctgagagctcagaggaagtagatgccaacaatggacgctcggagact
aaacctgagctgcttcaggaataccttggtcctggcctgcagggccagaggaactggatc
aaggagggttgtgatgtgggatcccatgcggttctatcctcgagcccagaagaacagtgc
aagcctggggtggaaacccatcaggtcctgcaagaagcccccctggatactggccccact
gagatatcagtacccaacgtgtatgagaccttgcagtgcaggctgagctcccttgaggca
gttgtagctgccttgcgccaccactcgctaaactttccaaagacagtggaagcagaaaac
agggctccggggtcctctggagatgagaaagaagcctcaggacctggacagcaggaggca
gctcgcctcatagagaggaacgcctggctgcggctagccctgtgcaaccgggaggatgag
ttggcatgcactcaggcttcactgcacgacgcccaggcagagaaggagactctgcagaga
aaggtacaggagctggaggattccctgatgcagctggaggcctccctgcctccccccatc
ctcagagccgggcgtagaaacagcaactccagcagttctggggcagaaaggagaccctgg
gcgcctcaggactctcccatggctcacccctttctccaacgcctcaagagtgactccagc
acccagagctttgggtgcctttccacacagcatccagtcccagagacgtacctcatggaa
gaccaaatgaggcagcttcaggggagcattgagaagttgaagtgcttcaaccgccttctt
ctggctgtgctccagggctacaagggccgctgtgagagcctcagcattaaactggccaag
cgggaagctgaggccacagccctgtgcctggctctgcagtatagtgaggactgtgaggag
gtgtatgaggtgctgcttgctctgaagatggctggcttaggaactggagttggaactacc
aaggttgacctgcaggctgctgagaaggaggcctctaggctgctggtgaagaaggaagca
accatggatgtagagacaccccagcccagctcagagggcagtggtgtggacaagcctaca
ccagaggaactggctgctcagctccatggctatgtccagcatctccgggaacgctgggct
ctggtgaagatcccagaagcgcttggccctgtcactgtacccaaggccactatgccccat
gcagaagcaacagtgcaggccattctggagatacagcctggccccgccttgccccagctg
gagaagtctcagatccagcaggacctagcagcaactcgggacagtctggctgatctggtg
ctgaggctgcagctaacacagcgagagaagcgtgggttggagctgcgggaggctgcactg
cgggcccagggccctgcccaccagctgctcctgcagcagctttgctgggagcgggctcac
cttgcaggtgatggcagcagcggaggcagcagtgaggacccaagcagtgaggaggaggct
ggggaggatagacagcagcactaccagggccctcctgccctcctgggtggtcagatgggc
aaagtgtgggactctgagaatgtgtcccaggaactgtcagcgtccctggcccgggcaaca
gacctgcgggcacagctgcagtccctgcggcggcagctggaacaggtggctcacaagggc
cgaaccagacgtgttcagagtgcggagctgtccagagaactgtgcaaggctcacagcgct
ctggctttggccttcagaggagcccaccggaagcaggaagagcaacgccggaagttggag
cagcaggtgacttggatgcaggctcagcaggcggaagagctggcagtgctgacagccacc
gctagggccctggagaagcctggggcaccccagccagcccagactttcctgtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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