KEGG   Microbacterium paludicola: BO218_15620
Entry
BO218_15620       CDS       T04601                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mpal  Microbacterium paludicola
Pathway
mpal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BO218_15620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpal03021]
    BO218_15620
   03019 Messenger RNA biogenesis [BR:mpal03019]
    BO218_15620
Transcription machinery [BR:mpal03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BO218_15620
Messenger RNA biogenesis [BR:mpal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BO218_15620
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind AAA_25 NACHT Spore_III_AA AAA_22
Other DBs
NCBI-ProteinID: APF35460
Position
3301373..3303529
AA seq 718 aa
MESNSENLTIDETVDAPTEEAAEQQDAVVETPTEAAAPAEETRAEAAASDASDVAAAEAD
APAEAVETAEAAAPAEAAAPAEPAAPAEKPAKAPRKRAPRRAKSTDVPATDEAPAAETAA
SDAPAETSASDAEAPAADVVSAEAASTADETAPAADAAEATADAETTPAETTEAPKKPAR
GRGRGRNAKKDAETEAAPGTDAPAESADAPAAEGASETPAEQAPDAEASSDDSSKTESGE
GDGESSGRSRSRSRSRNRNRNKDNAQGNQGQAGQNQGGNQNQGAGQNQGGNNGPDDDDAP
GQSGRGRQRNKRRGQGGGGDEFETEISEDDVLIPIAGVLDVLDNYAFVRTTGYLPGPQDV
YVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDSINGLSVEDAAGRVEFG
KLTPLYPQERLRLETGPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIAGAIAQ
NNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELG
RDVVVLLDSITRLGRAYNLSAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILA
TALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSSDEV
KITWKLRRALAGLDQQHALGVILDKLKETQSNVEFLVQMQKSIPAPTTHSGGHDNSIR
NT seq 2157 nt   +upstreamnt  +downstreamnt
gtggagtccaactccgagaacctgacgatcgacgagaccgtcgacgccccgaccgaggaa
gcggccgagcagcaggatgccgtcgtggagacgcccaccgaggcggctgcccccgctgag
gagacgcgcgccgaagccgcggcatctgacgcctcggacgttgctgctgccgaggcggac
gccccggcggaggccgtggagaccgccgaggccgcggcgcccgccgaggccgcagcgccc
gcggagcccgcagcgcccgcggagaagccggcgaaggcgccgcgcaaacgcgcgccccgc
cgcgccaagagcaccgatgtcccggccaccgacgaggcgcccgccgcggagaccgctgcg
tccgacgcgcccgcggagacctccgcgtcggacgcggaggcgcccgccgcggacgtcgtc
tcggcagaggccgcgtcgaccgccgacgagacggctccggccgccgatgccgccgaggcg
accgccgacgcagagaccaccccggcggagaccaccgaggcgccgaagaagccggcgcgt
ggccgtggccgcggccgcaacgcgaagaaggacgccgagaccgaggccgctccgggcacc
gacgccccggccgaatccgccgacgctccggctgccgagggcgcttccgagacgcccgcc
gagcaggcgccggacgccgaggcatcctccgacgactcgtcgaagaccgagtccggagag
ggcgacggcgagtcgtccggccgttcgcggagccggtcgcgcagccgcaaccgcaaccgc
aacaaggacaacgcccagggcaaccagggtcaggccggccagaatcagggcggcaaccag
aaccagggcgcgggtcagaaccagggcggcaacaacggcccggacgacgacgacgcgccc
ggccagagcggccgtggccgccagcgcaacaagcggcgtggccagggcgggggcggcgac
gagttcgagaccgagatcagcgaggacgacgtcctcatcccgatcgccggtgtgctcgac
gtcctcgacaactacgccttcgtccgcacgaccggctacctccccggcccgcaggacgtc
tacgtctcgctcggccaggtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggc
gcgatcaagcagccccgcgagggcgagcagtcgagccggcagaagtacaacgcgctcgtc
aaggtcgactcgatcaacggcctgtccgtcgaggacgccgccggccgcgtcgagttcggc
aagctgacgcccctgtacccgcaggagcgcctgcgcctcgagaccggccccgagaagctg
acccagcggatcatcgacctcgtggccccgatcggcaagggacagcgcggtctcatcgtc
gcgccgcccaaggccggcaagacgatcgtgctgcagcagatcgccggcgcgatcgcgcag
aacaaccccgaggtccacctcatggtcgtgctcgtcgacgagcgccccgaagaggtcacc
gacatgcagcgcacggtcaagggcgaggtcatcgcctcgacgttcgaccgtcccgccgag
gaccacaccacggtcgccgagctcgcgatcgagcgcgccaagcgtctcgtcgagctcggc
cgcgacgtcgtcgtgctgctcgactcgatcacgcgcctcggccgcgcctacaacctgtcg
gctccgacgtcgggacgcgtcctgaccggtggcgtcgacgcgtcggcgctgtacccgccc
aagcgcttcttcggcgcggcgcgaaacatcgagaacggcggttcgctcacgatcctcgcg
acggcgctggtggagaccgggtccaagatggacgaggtcatcttcgaggagttcaagggc
acgggcaacagcgagctgcgtctgtcgcgtcagctggccgataagcgcatcttccccgcc
gtcgacgtcaacgcctcgtcgacgcgtcgcgaagagatgctgctctcgtccgacgaggtc
aagatcacgtggaagctgcgccgtgccctcgccgggctcgaccagcagcacgcgctcggc
gtcatcctcgacaagctcaaggagacgcagtccaacgtcgagttcctcgttcagatgcag
aagtcgatcccggcgccgaccacgcactcgggcgggcacgacaacagcatccgctga

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