KEGG   Methylocystis parvus: F7D14_10630
Entry
F7D14_10630       CDS       T06304                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mpar  Methylocystis parvus
Brite
KEGG Orthology (KO) [BR:mpar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mpar03016]
    F7D14_10630
Enzymes [BR:mpar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     F7D14_10630
Transfer RNA biogenesis [BR:mpar03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    F7D14_10630
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: QGM97879
UniProt: A0A6B8M8C1
Position
2246547..2247161
AA seq 204 aa
MAIRLHQGDLPAEAALSNIVAIDTETLGLNPHRDRLCLVQLSFGNGDAELVQIAKGQTRA
PNLEKLLADPNILKLFHFARFDLAILAKTFGFMPAPVYCTKIASKLTRTYTDRHGLKDLV
RELAGIEISKQQQSSDWGAANLTDAQQAYAASDVLYLHQLKEKLDAMLAREGRNELAWAC
FDFLPARAQLDLAGWPEIDIFSHE
NT seq 615 nt   +upstreamnt  +downstreamnt
atggccatcagactgcatcagggcgacctccccgcggaggccgccctttcgaacatcgtc
gccatcgacacggaaacgctgggcctgaacccccacagagaccggctgtgcctcgtgcag
ctctctttcggcaatggcgacgcggagctcgtgcagatcgccaagggccagacgcgcgcg
cccaatctcgaaaagcttctcgctgatccgaacatactgaagctattccatttcgcgcgt
ttcgacctggcgatcctggccaaaaccttcggtttcatgccggcgccggtctattgcacc
aagatcgcgtccaagctcacccgcacctataccgaccgccacgggctgaaggatctggtg
cgggaattggcgggaatcgaaatctccaagcagcagcaatcctcggattggggcgcggcg
aacctgaccgacgcgcagcaggcctacgccgcctcggacgtgctttatctgcatcagctc
aaggagaagctggacgcgatgctggcgcgcgaagggcgaaacgaactcgcctgggcctgc
ttcgattttctgcccgcgcgggcgcagctcgatctcgccggctggccggagatcgacatt
ttctcgcatgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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