KEGG   Marinomonas posidonica: Mar181_3030
Entry
Mar181_3030       CDS       T01508                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mpc  Marinomonas posidonica
Pathway
mpc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mar181_3030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpc03400]
    Mar181_3030
Enzymes [BR:mpc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Mar181_3030
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mar181_3030
DNA repair and recombination proteins [BR:mpc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Mar181_3030
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Ribosomal_S13
Other DBs
NCBI-ProteinID: AEF56057
UniProt: F6D1G8
Position
complement(3348281..3349099)
AA seq 272 aa
MPELPEVETTLRGIEAHLVGRKLVQVDIRQPQLRWLITPELRTEMVGQEITHLSRRGKYI
GIHTAKGTLIIHLGMSGSLYFVPANTPPLFHDHVDFCFAGDGDWLRYTDPRRFGAILWTT
EDWQTHDLLRHLGPEPLTDDFNVDYLYAKAKGRKMPIKTFIMDSKVVVGVGNIYANEALF
KAGIRPNRMAGNISKVRMRKLVECIKIVLANAIKQGGTTLKDFVGGDGKPGYFKQELAVY
GRAGLPCTQCQKVLTEVRQAQRSTVYCAKCQT
NT seq 819 nt   +upstreamnt  +downstreamnt
atgcctgaattaccggaagtagaaaccacactgcgtggcattgaagcgcatttagtcggg
cgaaaacttgttcaagtggatattcgccagccgcaattacgctggttgattaccccagag
ttgcgcactgaaatggtggggcaagaaattactcacttatcacgacgtggaaaatacata
ggtattcataccgccaaaggtactttgatcattcatttaggcatgtcaggcagtttgtat
tttgtgccggccaatacaccacctttgtttcatgatcatgtggacttttgttttgcgggt
gatggtgactggttacgctataccgacccaaggcgtttcggtgctattttgtggaccacc
gaagattggcaaactcatgatttattacgtcatcttggtcctgagcctttaacagatgac
tttaatgtggactatctatacgccaaagctaagggacgtaaaatgcccatcaagactttt
attatggacagtaaagtcgtggttggggtgggcaacatatacgcaaatgaagcgttgttt
aaggccggtattcgcccaaatagaatggcgggaaatatttccaaagttagaatgcgtaaa
ttggttgagtgcattaaaatagtgcttgccaatgccatcaagcagggcggcaccacatta
aaagattttgtcggtggtgacggtaagcctggttactttaagcaagagttggcggtttat
ggtcgagctggcctgccatgtacccagtgtcaaaaggttttgacggaggttcgacaggca
caacgcagtacagtgtattgtgcaaaatgccaaacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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