KEGG   Monomorium pharaonis (pharaoh ant): 105830504
Entry
105830504         CDS       T05760                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105830504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpha03019]
    105830504
Messenger RNA biogenesis [BR:mpha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105830504
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     105830504
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT
Other DBs
NCBI-GeneID: 105830504
NCBI-ProteinID: XP_012525320
Position
Unknown
AA seq 2404 aa
MNLDSLSFTLSQISYLVANLSKKNYEDSCQRISGYVQWHGLEVDRHLLRCLISCVDFSKG
EPSDSSAKDYFQAKLLKQECNSLLSKSSFISTLCFAIDNPLHHQKSLNPTPKFFVNLKKT
LGLTLVQEVAFAIALQHSENAEIRALALEHTQKQLPELIKNYINSEISNKHHEGGLHDSL
PQVLHLILIQAFHTANPYNLPTETKEKFRKHLRRDFPRELVPVVLAPFLYPGDEEPLQLK
IELNMAVTQMDSSTLVELIMELGYSFTSSVEECRSALTGLGAREISPACVARVLSQMART
CSNLDDAGGLQTFWGNSTASQDSNKEKSSDSAIPTTWNIEVFVLTLKEIQSTLSWNEVII
KLDHSEFVIKDRQGLNLLITGLKLGLQHQGYPPDMFPVELLYRHWENVEGQFSLIQQILK
CPDIFCFADYPYHSVTVDVLKAAPESDSKEGQTWRSLNIVELLLHMAERGLCNSVQEIFK
WPLQHCPDVLILALLQINPPFTLLRQELFTTLLPIFLGNHPNSAVILHHAWHANNPKIKT
LIMHAMADWYTRGDHDQTRLSRILDVAQDLKALSALLNSQSFQFVIDLACLASRREYLKL
EKWLTDKIRDHGDVFVTACVKFLQRRCPQVMGPGIKEDPTVPKASQLPQETLTTILACLQ
VCTGNVSQELSELIMTMVQNCSLMLSKSTMNRPPPPGVLRHRGLEPFNPAALGSQLFSSK
QVDPLGNLGSSLASMGLGTGLGPPSSSAFNLPGALGPLVSTPGSPSRLMGPSPSPFPTML
PLSSQLHSGPVGTQGPSVLPGGTIGGLGRLGPPAGIEKARIPETSNLFPDMGQNVSKEVE
DEANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSGIRREREVFNCMLRNLFEEYRFFPQY
PEKELQITAQLFGGIIERGLVNSYVTLGLALRFVLDALKKPEGSKMYYFGITALDRFKSR
LKEYQTYCEHVRTIPHFTEFPPHLVEYIEYGLQGQEPPSRPQGPKTLAAMLAPVTTPYKT
ITTTTITTSTTQAKPSTTPTTSLSARPSMPSVANATNIDTLLVATDKEEKITTPPEALQD
KTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCIK
LPEVNKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQIDIDL
KSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVGELKPIIYLKDPEKLRNLEYQLSHPNKKLETTNNQQQSQGPIE
ELVGPTTSSTINPQTAPPANTTPSLPTGPPEPRFNYMDISVTGISNISQHITINNQIHLF
QTHPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARH
MARNLTAGMAMITCRDQILASISTNLKQAFLTALIGTTPQQKEHVEQAASIVAAENMELA
CAFVQKTAIEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGV
TPQQMAVYEEFARNIPGFLPLSERETQTLFIPKPISEAPLTAFTPNSAVAVAAAQQVAAY
ATVAVSNDEVGAMLEKLATEVDVLLNAMGPVIPPPQHAILHSLLESIVVTRRSRDANAAL
ALLKKAVEGLLDGPIFNSGVIDTDNLVQRYRELHLRILKCLQDPRAYGMQWTNKHVTRCL
IECREDYRYNFEAVDYLIRSHLISLPQYDLAVAQAVEAGYTLATVFAMQLVQLYLIDERQ
ATHVTETDLFHTIEVLARMAHHRTPPEGISLYRLTSLVESLRANHDSGVLVDRAPAGPTA
HIHSGILQVRARDFDDPPGLMDKTEYLLREWVQMHHNPQYARDPTKAFSIFVHQMNIHGI
LKTDDLITRFFKLSTQMCVDLCYRTLSETGSAPSIIRAKCFHSLDAFVRLVALLVKHSGD
ATNTHTKINLLNKVLGIVAGVLLQDHEIRGSDFQQLPYHRIFIMLFLELCAPEPVLEAVN
FQVLTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLF
KYLAPYLRNAELAKPVTSLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLI
LSAFPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASTIQPLTFKKELDSYLKARAPVT
FLSELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAHIRNKGHAPNMSTIAHSAHMDIF
QNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTILYLFAEANTEAIQEQITRVLLER
LIVNRPHPWGLLITFIELIKNPNYKFWKHEFVHCAPEIEKLFESVARSCMVQKQVPTTET
EIPE
NT seq 7215 nt   +upstreamnt  +downstreamnt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaatttg
agtaagaaaaattacgaggacagctgtcagcgcatatcgggctatgtgcagtggcatggt
ctagaagtagaccgacacttgttgcgctgtttaatctcgtgtgttgacttttccaagggt
gagccatcagattcgagtgcgaaagattatttccaggcaaagttgctaaagcaggagtgc
aatagcttattgagcaaatcttcttttatatctactttgtgctttgctatagataatcct
ttacatcatcaaaagtcgttgaatcccactccaaagttttttgtcaatttgaaaaaaaca
ctcggtctgaccttggtacaggaggttgcgtttgcgattgcgttacagcattcagagaac
gctgaaattcgtgctttagctttagagcatactcagaagcagttgcctgagttgataaag
aattatattaattctgaaataagtaacaagcatcacgagggtggcttgcacgactctttg
cctcaggttcttcatcttatacttatccaggcatttcatactgccaatccatacaatcta
cctacggaaacgaaggaaaagtttcgtaaacatttgagacgtgactttccccgtgaactg
gtaccagtggtgctagcaccatttctgtatccaggagacgaggaacctttgcaacttaaa
attgaattaaacatggctgtcactcagatggatagcagcactcttgtagagctgattatg
gaattaggatacagctttactagtagcgtagaagaatgtcggtcggcattgacgggttta
ggtgccagagaaatatctccggcatgtgtcgctcgtgtattatcacaaatggcacgtacc
tgcagcaatctcgacgatgctggaggactacaaacattttggggcaactcgaccgcctcg
caggactccaataaggagaaatcatcggacagtgctattcctacaacatggaacattgaa
gtatttgttctaacgttaaaagagatacaatctacattgtcttggaacgaagtcatcata
aagttagatcattcagaatttgttatcaaggataggcagggcttaaacttactaattacg
ggtctcaagctgggtttgcagcatcagggatatccacctgacatgtttcccgttgagctc
ttgtatcgacactgggaaaatgtagaaggtcaattttctttaattcaacaaatcctcaag
tgcccagatatattttgcttcgccgactatccgtatcattctgtaacagtcgacgtactg
aaagcggcacctgaaagtgacagcaaagaagggcaaacgtggcgatcgttgaacatagtc
gagttgcttttgcacatggctgaaagaggcttgtgcaattctgtgcaagagatcttcaaa
tggccactccaacattgcccagatgtactcattttggcgttattgcagataaatccacct
tttacattattgagacaggaattgttcaccacattgttgccaatttttcttggcaatcat
ccgaattctgctgtgatactgcatcatgcatggcatgctaataatcccaagataaaaaca
cttataatgcatgctatggcagattggtacacgcgtggtgatcatgatcaaacaagatta
tcgcgaatcttggatgttgcgcaagatttgaaagcactctctgccctacttaactcacaa
tcgtttcaattcgtcattgatcttgcctgtttggcttctcgacgagagtacctgaaactt
gaaaaatggttaacagacaagatcagagatcacggagacgtttttgtcactgcatgtgtg
aaatttctacaacgacgatgtcctcaagttatgggcccaggaatcaaagaagatcctacc
gttcccaaagcaagtcaactgccacaggaaacactcacaacaatcttagcttgcttgcaa
gtttgcaccggaaatgtttcacaagaactctcggagttaataatgacgatggtgcagaat
tgtagtctaatgctgagtaagagcaccatgaacagaccaccacctccaggagttctgaga
catagaggattagaaccatttaatccagcagctctaggaagccaattattttcctcaaaa
caagtggatcctcttggaaatcttggttcaagtcttgcttccatgggtcttggaacaggc
cttgggcctccaagcagctctgcgtttaatttacctggtgcgctaggtcctttggtttca
acacctggctctccttcaagacttatgggaccgtctccaagtccatttcctactatgtta
ccattatcttcgcaattacactcaggtccagttggtactcagggaccctctgtgctcccc
ggtggtacgataggtggattgggacgtctcggaccgccagctggtattgagaaagcgaga
ataccagagacttccaatttgtttccagatatgggacaaaatgtgtctaaagaagtcgaa
gacgaagctaatagctattttcaacgtatatacaatcatccgcctcacccaactttatcg
atcgacgaagtgcttgacatgttgaaaaaatttcaagattctggtattagacgagaaaga
gaagtgtttaactgtatgctgcgaaatttattcgaagagtacagatttttcccacagtat
ccggaaaaggaattacaaataacagcacaattgtttggcgggattatcgagaggggtctt
gtcaacagttatgtgacacttggattggcgctgcgatttgttcttgatgcacttaagaaa
ccagaaggcagtaagatgtattatttcggcataacggctttggatcgttttaagagtcga
ttgaaggaatatcaaacgtattgtgaacacgttagaacgattccacatttcaccgaattt
ccgcctcatttagtagagtatatagaatatggattacaagggcaagaaccaccgtcgaga
ccgcaaggtccaaaaactttagcggcaatgttggctccagttacaaccccatacaaaact
ataactacaaccactatcacgactagcaccacgcaagcaaaaccatctacaactccgact
acgtctctttcggctagaccttctatgccttctgtcgcaaatgcaactaatattgatacg
ttgcttgtggcaacggataaagaggaaaaaattacgacgccgccagaagctttgcaagac
aaaactgctttcatctttaataatcttagccaactgaatctgcaacagaaatgtgacgag
attcgcgaaattgtcacggaagaatattggccgtggatggcacaatatctagtgatgaaa
cgtgccagcatagaattgaactttcatgctttatactcgaattttttagattgtataaaa
ttacctgaagtgaataaaatggttacgagagaaacattccgaaatatcaaagttctttta
cgaagcgataaaggaatagctaatttctctgatcgatcgctattgaaaaatttaggacac
tggcttggaatgttgacacttggcaggaataagcctattttacagatagatatagattta
aaaagcttacttgttgaagcatatcacaaagggcaacaagagcttctttatgtagtaccc
tttgtcgcaaaagtacttgaaagttgtgcaaaaagtcgtgtttttcggccacccaatcca
tggactatggcaattatgaacgttttagctgaattacatcaggaacctgacttgaaactg
aatttaaagtttgaaatagaagtactttgcaaaaatctaagcattgatgttggggagcta
aaaccgatcatttacttgaaagatcctgaaaaattgcgtaatctagaatatcaattgtca
catccgaataagaaattggagacgactaataatcaacagcaatctcaggggcctatagag
gaattagttggtccgacaacgagcagcaccatcaatcctcaaactgcgccacccgcaaac
acaacaccctcgttgccgactggtccacccgaaccacgatttaattacatggatatatct
gtaacgggcatttctaatatatctcaacatattactatcaacaatcaaatacatttgttc
caaacacatcctcatttgaaacagtttgttcgcccggcggttgaaagagcaattcaggag
tggattcatcccgtagtagatcgatctatcaaaattgctcttacaaccagcgaacaaatt
gtgaggaaagactttgcattggatccagaagaagtgcgaatgcgtacagcagcacgtcac
atggcgcgcaatctaacagctggcatggctatgattacatgtcgtgatcagatcctagca
tcgattagtacgaatttgaaacaagcttttctcacagcgttgattggtacaactccacag
cagaaggaacatgtcgaacaagcagcgagtatagttgctgctgagaacatggaactcgcg
tgcgcatttgtacaaaagaccgccattgagaaagcaatacctgaaatggacaaacgatta
ttgaacgaaattgagttgcgaaaaattgctcgacaggaaggaagaagatactgtgatcct
cttgctaagtatcaagccgaaagaatgccagagcagataaggctaaaagttggtggcgta
acacctcagcaaatggctgtgtatgaagaatttgctagaaatattccaggatttcttcca
ctctccgaacgggaaacgcaaacactctttataccaaaacctatttctgaagctcctctc
accgcatttacacccaactctgcagtggcagtcgctgcagcacaacaagtagcagcctat
gcaactgtagcagttagcaatgacgaagtgggtgcaatgttagaaaaacttgcaacagaa
gttgatgttctattgaatgctatgggacctgtgatacctccacctcagcatgctatcctt
cacagtcttctggaatctattgtagtcacaagaagatcaagagatgccaatgcagctttg
gcattattaaagaaagcagttgaaggtttgctagatggacccattttcaacagtggtgtc
atcgatactgataatttggtacaacgctacagagaactacatttacggatcttgaagtgc
cttcaagatccacgtgcatatggtatgcaatggaccaacaagcacgtaactcgttgtcta
attgaatgccgggaagattaccgatataatttcgaagctgtagactatctcataagatct
cacttgattagtcttccgcaatatgacttagctgtagcgcaagctgtagaggcgggctac
accttggcaacggtattcgctatgcagttggttcaactttatttgattgacgagaggcag
gcaactcatgttaccgaaactgacttattccatacgattgaggtattagctcgaatggca
catcatcgaacaccaccggaaggaatttcgctgtacagactgacaagtttagtagaatca
ttgcgtgccaatcacgattccggtgtattggtagatcgagctccagcaggacctacagcg
cacattcattccggaatcctgcaggtgagagctcgagattttgacgatccacctggattg
atggataagacggagtatctattacgtgaatgggtacaaatgcatcataatccgcagtat
gcacgagatccgacaaaagcgtttagcatatttgttcatcaaatgaacattcacggcatc
ttgaagaccgacgatctcatcaccagattcttcaagttgagcacacagatgtgcgttgac
ctttgctaccgaactttatcagaaactggctcagctccctcgatcatacgtgcaaagtgc
tttcattcattggatgcgttcgtacgcctagtagcactcctggtgaagcattcgggcgat
gctactaacacccacactaagattaaccttttgaataaggtgcttggtattgtagccggt
gtactattacaggaccatgagatacgtggttccgattttcaacaattgccataccacaga
atctttattatgctctttttggaattgtgcgcgcctgaaccggtattggaagctgtaaat
tttcaagttttgaccgccttctgtcacaccttgcatattttgcgaccagcgaaagcatca
ggcttctgttatgcctggttggagttggtttcgcaccgagtcttcatcggccgcatgctt
gccattacaccacagcaaaagtgctgggggatgtatgcacaactactcatcgatttgttc
aagtacttggcaccatatcttcgaaatgcggagctggcgaagcctgtgacgagtctgtac
aaagggacactgcgtgtgttacttgtgttacttcatgatttcccggagttcctatgcgat
tatcattatggattttgcgatgtgataccaccgaattgcatacagatgagaaatctaatt
ctgagtgcatttccgagaaatatgcgcctgcctgatccatttacgccaaatctgaaagtt
gacatgctacaggagattgctcacgctccgcgtgttctcaccaattttgcgtccacaata
cagccgttgacgttcaagaaagaacttgattcttatctgaaggcacgtgcgccggtcacc
tttttatctgaacttcgcagcaatttgcaggtgtcgcaagaggctggtgtgcgttataac
attcagctgatgaatgctctagtgctttatgtaggcacacaggctattgcacatattcgc
aataaaggtcatgctcctaatatgtctaccattgcacactccgcacacatggacatcttc
caaaatttggctgtagatctagatacggaaggcagatacttgttcctaaatgccattgcg
aatcaattgcgttatcccaacagtcacacgcattacttcagctgtacgattctctatctg
ttcgctgaagcgaatacggaagcgatacaggagcagattacaagggttcttctggaaaga
ctgattgtcaatagaccacatccatggggtcttctcatcactttcattgaattgatcaag
aatccaaattataaattttggaaacatgaatttgtacattgtgcaccggagattgagaaa
ttattcgaatctgtcgctagatcgtgtatggtgcagaagcaggtacccacgacggagacg
gagattccagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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