KEGG   Monomorium pharaonis (pharaoh ant): 105834969
Entry
105834969         CDS       T05760                                 
Name
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    105834969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpha03400]
    105834969
Enzymes [BR:mpha01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105834969
DNA repair and recombination proteins [BR:mpha03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     105834969
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_IV DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT Ezh2_MCSS
Other DBs
NCBI-GeneID: 105834969
NCBI-ProteinID: XP_012533315
Position
Unknown
AA seq 897 aa
MATDLEAKIEFIQLCETLEGIAKTHKIKKKEQILETFIDKCRNIGNKIKIEYPKSDVSLY
PILRLILPHLERQRGPHNLKQTSLAKLYIDVYGFAKNSNNYKKLINYREPMSNELLDMEN
DFANRAYCVLEKKLPRTGTGFTIARINTFLDGISEKSVMRKKKVETFRVLFCQITGFEMK
WVTRIILKDLRLGIKTERILHIYHPDAYDKFLVTNDLREISNQLCDPKIKFKCSIQIFSH
FKPMLLERCNIENINKLFRSNDLYYVQTKYDGERSQLHMKDGTFKYFTRRGYDITNNPGY
GETASSGFLTAVFMRHLNPNCHSFILDGELIAWHKEKKIFATKGMNLDVKHLSPNSRHQP
CFVAFDIILHNNILLVDVPYKNRLKLLSDIFTEEEGLLVVCESTLISNREQLIELFNTCL
RNNEEGLVVKNYNMKYKPNVRDGNGCYKIKAEYSDNLVQDLDLIILGGYYGEGKYTGIIK
SFMMGVAVPASNEKENPSQFVSVVSVSTGIKDEMLHHLETKLAPYWIKEQPEKIISSKRN
QPNVWIYPEHSIILTIRATEMIRSNEYQTGYTLRFPRVVNVRTDKPWYSTCTISELQSLA
RDEGMIQKLTKREATLYDLDQVPVSKLQKIAGPSKSITCNVYNEQVQLTRILDGKEICVI
NGNDELPKEQIEEILQQHSAKIVQNPKNTTFCVIVGNDKTIRGKEEVNRRKHDVVTLDWF
KRITNLSNGTSLDDFLPWELLCCQDITKHRVAENYDEYYDNFTIDADEESLKRSFGKIKP
IIFKNADNQFEKEKQMDQELFRSTSPYSLFRNIIGFFENQSCYAKFKFRFMSGTVKDSID
DSVTHVFVEDEETSTIIKNMKAQLQEQTYTKIIKCKWIEECFQNYRLCEITDYLIDY
NT seq 2694 nt   +upstreamnt  +downstreamnt
atggccactgatttagaagctaaaattgaatttatacaattatgcgagacattggaaggt
attgccaaaacacataaaattaagaaaaaggagcaaattttggaaacatttattgacaaa
tgtcgaaatattggcaataaaataaaaatcgaatatcctaaatcggatgtatcgctctat
cccattttaagactgatcttacctcatcttgaacgacagcgtgggccgcacaatttgaag
caaacttcactggcaaagctttacattgatgtttacggttttgcgaaaaatagcaataat
tataaaaaattaataaattatcgagaacccatgtcgaatgaattgctagatatggaaaat
gattttgctaatagagcttactgcgtattggaaaaaaagttacctcgaactggcacggga
tttacaattgcacgaatcaatacgtttcttgatggtatatctgagaaaagtgtaatgaga
aagaaaaaggttgaaacgtttcgtgtacttttctgtcagattacgggattcgagatgaaa
tgggtgacgcgtatcattcttaaagatttacgacttggtataaaaacggaaagaatacta
cacatttatcatcctgatgcttatgataaatttcttgtgacgaatgatctgcgtgagatt
tctaatcagttatgtgaccctaaaatcaaattcaaatgtagtatacaaatattttcgcat
tttaaaccgatgctattagagagatgcaacatcgagaatatcaacaaattatttcggagc
aatgatttgtactacgtacaaacaaaatacgatggcgagagatcgcaacttcatatgaag
gatggaacatttaaatatttcacacgcagaggatatgatattacaaacaatcctggatac
ggagaaactgcatcttcgggtttcttaactgcagtatttatgcggcatttgaatcctaat
tgtcattcttttatattggatggagaattaatagcttggcataaagagaaaaagatattt
gctacaaaaggtatgaatcttgatgtcaaacatttgtcgccgaacagtcgtcatcagcca
tgtttcgtcgcatttgatatcattctgcataataacattttacttgtcgatgtaccttac
aaaaacagactaaaacttctcagtgatatatttaccgaagaggaaggtttattggtcgta
tgtgagtctactttaatttcaaacagggaacaattgatagagttattcaatacatgcctc
cgtaataacgaagaaggacttgttgtaaagaattataatatgaaatataaaccaaatgtt
cgagacggcaacggttgttataagattaaagcagagtattccgacaatttagtacaagac
ttagacctcatcatacttggcggttattatggggaaggcaaatatacaggaataattaaa
agctttatgatgggtgttgctgttccagcgagcaatgaaaaagaaaatccatcacaattt
gtttctgtcgtatctgtgagtactggaataaaagatgaaatgttgcatcatcttgaaaca
aaacttgccccatattggatcaaggaacagcctgaaaaaataataagctctaagagaaat
cagccaaatgtatggatttatccagaacattctataattttaacaatacgagcaaccgag
atgatacgcagtaatgaatatcaaacggggtataccttacgatttcctagagttgtgaat
gtaaggacggataagccatggtacagtacatgtactatttcggaactccagtcgttagcc
agagatgaaggaatgatccaaaagttaactaagcgggaagctactctgtatgatctcgat
caagtaccagtctctaaattacaaaagatagcaggtccaagcaaatcgattacatgcaat
gtgtacaacgaacaagtacaactcacgcgaatactagatggaaaagaaatttgcgtgatt
aatggtaacgatgaattgccaaaagaacaaattgaagaaatattgcagcagcatagcgca
aaaattgttcaaaatccaaaaaatacaactttctgtgtgatagtaggcaatgataaaacg
atacgaggaaaggaagaagtgaaccgtagaaaacatgatgttgtaactttagattggttt
aaacgtatcactaatctatccaacggaacctcgttagatgattttttgccatgggaattg
ttatgctgtcaagatattactaaacaccgagttgcagaaaactatgatgaatactatgat
aactttactattgatgcagatgaggagagtttgaaacgttcatttggcaagataaaacca
attatttttaagaatgcggataatcagtttgagaaggaaaaacaaatggaccaggaattg
tttaggagtacatcgccttattcgctatttcgaaatataattggatttttcgagaatcaa
tcgtgttatgctaaatttaaattccgttttatgtcaggtacagttaaagacagcattgat
gactccgttacacatgtctttgtagaagatgaagaaacaagtactattataaaaaacatg
aaagcacagctacaagagcagacatatacaaaaattattaaatgtaaatggattgaggaa
tgtttccaaaattatcgattatgtgaaattaccgattacttgattgattattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (10)   
   Pfam (10)   
All databases (43)   

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