KEGG   Monomorium pharaonis (pharaoh ant): 105835268
Entry
105835268         CDS       T05760                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Pathway
mpha03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105835268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpha03021]
    105835268
   03019 Messenger RNA biogenesis [BR:mpha03019]
    105835268
Enzymes [BR:mpha01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     105835268
Transcription machinery [BR:mpha03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     105835268
Messenger RNA biogenesis [BR:mpha03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105835268
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 105835268
NCBI-ProteinID: XP_012533833
Position
Unknown
AA seq 195 aa
MPAPNSISVAVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDKVKLPGTAPDRPNIYDFGT
SYDEIYNDLLMKDKQYYTQNGLLHMLDRNRRIKPRPERFQLSKDKFDILITCEERVYDQV
IECMESRTKEDNQPAHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHEF
ESKFARTILHTVLFY
NT seq 588 nt   +upstreamnt  +downstreamnt
atgccggcgccaaattccatcagcgtagccgtaatatgttccagtaatatgaacagaagt
atggaagcgcacgcttttctcagcaaaaagggatttaatgtgaaatcatttgggactggc
gacaaggttaaattacctggtactgcaccggatcgccctaacatctatgactttggaact
tcatatgatgagatttacaatgatctattgatgaaagacaaacaatattatacacagaat
ggcttactgcatatgttagatcgaaatcgtcgaataaaacctaggccggaacgatttcaa
ttgtccaaggataaatttgatattttaattacatgcgaggaacgtgtgtacgatcaagta
attgaatgtatggaatctagaactaaagaagataatcaacctgcgcatttgatcaatatt
gacattcaggataaccatgaagaagccacagtaggatcgtttcttatatgcgaactagtg
acagtgttggcgaatagcgaagatttagataatgatatagatgaactgctccatgaattt
gagtctaagtttgcaagaacaatattacacactgtgttattttactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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