KEGG   Mycolicibacterium phlei: MPHLCCUG_03118
Entry
MPHLCCUG_03118    CDS       T04305                                 
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
mphl  Mycolicibacterium phlei
Brite
KEGG Orthology (KO) [BR:mphl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mphl03021]
    MPHLCCUG_03118 (sigB)
Transcription machinery [BR:mphl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MPHLCCUG_03118 (sigB)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AMO61923
Position
3166829..3167788
AA seq 319 aa
MANATTIRVDDDLDAQSPAADLVRVYLNGIGKTALLNAADEVELAKRIEAGLYAQHLLET
RKRLGENRKRELAEVVRDGEAARRHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLI
RAMEKFDYTKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKREMHQQ
LGREATDEELAAESGIPVEKINDLLEHSRDPVSLDMPVGNDEEAPLGDFIEDAEAMSAEN
AVISELLHTDIRHVLATLDEREQQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQIERE
VMAKLRNGERADRLRAYAS
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcaaatgccaccactatccgcgtcgacgacgacctggacgcccagagtccggccgct
gacctcgtgcgcgtgtatctcaatggcattggcaaaacggccttgctcaacgccgcggac
gaggtcgaactcgccaagcgcatcgaggccggactctacgcccaacatctgctcgagacc
cggaagcgcttgggcgagaaccgcaaacgtgaactggccgaggtggtccgcgacggtgag
gccgcacgccgccatctcctggaggccaacctgcggctcgtggtgtcgctggcgaagcgc
tacacgggacgcggtatgcccctgctcgatctgatccaggagggcaacctcgggctgatc
cgggcgatggaaaagttcgactacaccaagggattcaagttctccacgtacgccacgtgg
tggatccgccaggcgatcacccgcggcatggccgaccagagccgcaccatccggctgccg
gtccacctggtcgagcaggtcaacaagctcgcccggatcaagcgcgagatgcaccagcag
ctcggccgcgaggccaccgacgaggaactggccgccgaatccggcatcccggtcgagaag
atcaacgatctgctcgagcacagccgcgaccccgtgagcctggacatgccggtcggcaac
gacgaggaggccccgctgggcgacttcatcgaggacgccgaggccatgtcggcggagaac
gcggtgatctccgagctgctgcacaccgacatccggcacgtgctggccaccctcgacgag
cgcgagcagcaggtgatccggctgcggttcggtctcgacgacggccagccgcgcaccctg
gaccagatcggcaagctgttcgggctgtcccgcgagcgggtgcgccagatcgagcgcgag
gtcatggccaagctgcgcaacggcgagcgcgccgaccggctgcgcgcctacgccagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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