KEGG   Mycoplasmoides pneumoniae FH: MPNE_0275
Entry
MPNE_0275         CDS       T01926                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mpj  Mycoplasmoides pneumoniae FH
Pathway
mpj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MPNE_0275 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpj03019]
    MPNE_0275 (rnr)
   03016 Transfer RNA biogenesis [BR:mpj03016]
    MPNE_0275 (rnr)
Enzymes [BR:mpj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     MPNE_0275 (rnr)
Messenger RNA biogenesis [BR:mpj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MPNE_0275 (rnr)
Transfer RNA biogenesis [BR:mpj03016]
 Prokaryotic type
  tRNA degradation factors
   MPNE_0275 (rnr)
SSDB
Motif
Pfam: RNB S1 CSD2 OB_RNB
Other DBs
NCBI-ProteinID: ADK87230
UniProt: A0A0H3DLH9
Position
292698..294878
AA seq 726 aa
MKVLTDLQKRIFAIVKKENGKPIPPGIVVRMMENQAGFPGKQQVYRAIDDLLEWHIFRKS
GGATNQLLINYELADPVLDQKFQGILNLGNKNTGFVRPLDDDKTVYYIHFSNLAGALDGD
LVEFCPLDKPQVGDKFDAAVLKIVKRSRVLYAGNFLIEYSDFGQEFRIVADNPRFYLTPI
VNKASVPAELESNTKVAFQIDEYDPANNLCKVSIQQILGNNDEPLINLKAIMLDHSIVFE
KNDVVEQQAAKLQFDEKEQSKPYRKDLTELAFVTIDPATSKDLDDAIYVKRTDKGFVLYV
AIADVAYYVQRNSELDIEARHKTSSIYLPGYYVVPMLPERLSNELCSLNPNEKRYVVVCE
LNFDHEARLNFSEVYPATIVSQRRFAYSEVNDWLEDSDALKDESATVLESLKAGFTLSEL
IAEQRKKKGTIDLSHSETEVVVDQNYYPIEIRFLTHGKAETMIENLMVVANEAVAWTLTN
HKVHLPYRVHPRPSKKKLQMLLENIVELKITQPNFVLDTVTSTQIAAWLKENKDNPSYDI
FVILLLRTLGKAFYIVNPLIHFSIGSHHYTHFTSPIRRYADLTVHRLLWMNLFTPERFTD
TEREQLNAELEQICETINDTEIKINGCERTANDYLTTLYLSKQVGQTFHGFISAITSFGI
FMRMDENNFDGLIKITSIPEDFFVFEKDRMVLRGKRTNKVFRIGDRLTAKLTEIDTVQKR
AILTLV
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgaaagtattaactgatttacaaaagcgaatcttcgcgattgtgaaaaaagagaacggc
aaacctattcctccgggaatagttgtcaggatgatggagaatcaagctggttttccggga
aagcaacaggtatacagagcaattgatgacttgttagaatgacacatttttcgcaagtcg
ggtggtgctacaaaccagctgttaattaactatgaactagctgatccggtattggatcaa
aagtttcagggcattctcaatttaggtaacaagaacactggttttgtccgtcccttagat
gatgacaaaacggtgtactatatccatttttccaacctagcgggagcactggatggtgat
ctagttgaattctgtccgctcgacaaaccacaggtaggtgataagtttgatgctgcagtg
ctcaaaattgtgaagcgctcccgggtgctgtacgctggtaactttttgattgagtactcc
gattttggtcaggagtttcgcattgttgctgacaatcctcgtttttacctcaccccgatt
gtcaataaggcctcagttccagctgaactggagagcaatactaaggtcgcttttcaaatt
gatgagtatgatcctgcaaataacctgtgtaaagtctccattcagcaaatcttggggaat
aacgatgaaccgttaattaacctcaaggcgattatgttagaccactcgattgtctttgaa
aagaatgatgtggtcgaacaacaagcagcgaagttacagtttgatgaaaaagagcagagt
aagccctaccgcaaggacttaaccgaacttgcctttgtcacgattgaccccgccacttcc
aaggacttggatgatgcgatttacgtcaagcgcaccgacaaaggttttgttttgtatgtt
gccattgctgatgtggcttactatgtgcagcgcaacagtgaacttgacattgaagcccgt
cataaaacaagctcaatttacctcccgggatactatgtggtaccgatgttaccagaacgt
ttatcaaacgagctgtgttctttaaacccaaatgaaaagcggtatgtggtggtgtgtgag
ttgaactttgatcatgaagcacgcttaaactttagtgaagtgtatcccgctaccattgtc
tcccaacgtcgctttgcttacagtgaagttaatgattgactggaagacagtgatgctcta
aaggatgaaagtgcaacagtactagagagcttaaaggctggttttaccttgagcgaattg
attgctgaacagcgcaaaaagaaggggactattgacctatctcacagtgaaacagaagta
gtcgttgatcaaaactactacccgattgagatccgttttctcacccacggcaaggcggaa
acaatgatcgaaaacctaatggtggttgccaatgaagcggtggcttgaacacttacaaac
cacaaagttcacttaccttaccgggtgcatccccgaccaagcaaaaagaagttacaaatg
ttgttggaaaacattgtcgagctcaaaattacccaaccaaactttgtactcgatacggtc
acttccacccaaattgcggcttggttaaaggaaaataaggacaacccgagctatgacatc
tttgtcatcttgttattaagaacgctaggtaaagccttttacattgttaatccactgata
cactttagcattggttcacaccactatacccatttcacttcgcccatccgtcgctatgct
gatttaacggtacaccgtttgttgtggatgaatctgtttactccagagcgttttactgac
actgagcgtgaacagctcaacgccgagctagaacaaatttgtgaaaccattaacgatact
gagattaagattaatggttgtgaacggactgccaacgattacttaactacgctgtatttg
tctaaacaagtgggacaaactttccacggttttatttccgctattactagttttggcatc
tttatgcgaatggatgaaaacaactttgatggacttattaagattacctccattcccgaa
gacttctttgtctttgaaaaggatcggatggtgttgcgcggcaaacgcaccaacaaggtt
tttagaattggtgataggttaaccgcgaaactgactgaaattgatacagtgcagaaacgc
gccattctaaccctggtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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