KEGG   Methanosphaerula palustris: Mpal_0018
Entry
Mpal_0018         CDS       T00823                                 
Name
(GenBank) SMC domain protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mpl  Methanosphaerula palustris
Brite
KEGG Orthology (KO) [BR:mpl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpl03400]
    Mpal_0018
DNA repair and recombination proteins [BR:mpl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Mpal_0018
    Archaeal homologous recombinant proteins
     Mpal_0018
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_29 zf-C4H2 Collagen_mid
Other DBs
NCBI-ProteinID: ACL15414
UniProt: B8GI63
Position
complement(16309..18897)
AA seq 862 aa
MLHLVHLRIQNIRSYGEEPITIDFSPGISLFSGDIGSGKSTILSAIEFGLFGLGDVKSTH
LLRHHQKRGEVSLTFITGEEEYTINRTLVRTKKGVNQGPCSLTGPNGEEAYAPADLKPKV
LAILGFHEQPDPKATSRIFRYAIYTPQEAMKAVLSMKEEQRLDILRRAFGIEQYRWAATN
TEEAVIRQWLNTEIEICTRLCTGLEEDERQYEEVLLGCQQARAGVTEQAALLATLTGAVT
RIDEAIASLLPFQEKVGTLRGSLPGLTSAREARQAQRQGLLDEEKRIDRDLILIAGDEEA
LAQLKPKYQHLLEQKRAIVTLEERYLYHRDLQGREAALTARIRAEEEHLKERAGRCQRDR
ERAQAIHDERQNLARQQQTISAALKPLKTAVARLPEVTARVNTLVQGRERIRVERETQER
SLKTLKTEWEQIAAIGEGATCPQCQQTLTREHLVAMEQETWAKADEILGWQRDLAGLLKE
ADEMISSARIEQAALEEEQRTCNRKKTELAGITARIGGLLQEEERLGTAVDEEQKIREAL
TTGTFALDLQQQRQDVTSAIEALTDEVTRYIQAKKTIRDLEEEEVEKTFSALNARIKTKQ
GLLERRNANAEAIRSVETDILDLDKAIRTGEEALADAEVKLQELFDLETTATRQRDVIQE
QQQVLDQLRREVEYQTRTSEDLKKVILEKRAKAGTMQVFQEQRRWLRDHFLPAVESIERS
RLAQINETFNCFFQQWFTDLIAAEEISVRVDEAFTPLVEQDGFEVDADSLSGGERTSLAL
AYRLALNTIVRDESGADQKSLLILDEPTDGFSAGQLYRLRDILLDAGCDQLIMVSHEKEL
EGFVDTLYRVTKVDGISSVVRR
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgctgcacctggtacacctccggatccagaacatccggagttatggcgaggaaccgatc
acgatcgacttctcacccgggatctccctcttctcaggcgacatcgggagcggaaagtcg
acgatcctctcggccatcgagttcggcctcttcggcctcggcgacgtgaagtcgacccac
ctcctcaggcaccaccagaaacgcggggaggtcagcctcaccttcatcactggcgaggag
gagtacaccatcaaccggacactggtcaggaccaagaagggggtgaaccaggggccgtgc
tcactaaccgggccgaatggcgaagaggcctacgcacccgccgaccttaaaccgaaggtg
ctcgcgatcctcgggttccacgaacagcccgaccccaaggccacctctcgaatcttccgg
tacgcaatctacactccccaggaggcgatgaaagcggtcctctcgatgaaggaggagcag
cggctcgacatcctcagaagggcatttgggatcgaacagtaccggtgggcggccaccaac
accgaggaggctgtgatcaggcagtggctgaacacggagatcgaaatctgtacccgcctc
tgcaccggattggaggaggacgagcggcagtatgaagaggtgctgctcggatgccagcag
gccagggccggggtgacagaacaggcagcactcctcgctaccctgaccggggccgtcacc
cgaatcgacgaggcgatcgcctccctccttccattccaggagaaggtcggcaccctccga
ggttccctccccggtctgacctcggccagagaagccaggcaggcacagcgccaggggctg
ctcgatgaagagaagcggatcgatagagatctcatcttgatcgcaggtgacgaggaggcc
ctggcccagctaaagccgaagtatcagcatctcctggaacagaaacgggcgatagtcacc
cttgaagagcgttatctctaccaccgggatctgcagggtagggaagcagccctcacagcc
cggatcagagctgaagaggaacacctgaaggagcgggcaggccggtgccagagagaccgg
gagcgggcgcaggcgatccatgatgaacggcagaatctggcccgacagcagcagacgatc
agcgcggccctaaaacccctcaaaacggcggtggcgcggttgccggaggtgaccgcccgg
gtgaacaccctggttcaggggagggagaggatccgagttgaacgggagacccaggagagg
agcttgaagaccctgaagaccgaatgggagcagattgccgccatcggggagggagccacc
tgcccccagtgccagcagaccctgaccagagagcacctggtcgcgatggagcaggagacc
tgggcgaaggccgacgagatcctgggctggcagcgggatctcgccggactgctcaaggag
gccgatgagatgatcagcagtgcccggatcgagcaggcagcgctcgaagaggagcaacgg
acctgcaacaggaagaagaccgagctcgctggtatcacagccagaataggcggactgcta
caggaggaggagcggctcggcactgcagtcgacgaggagcagaagatccgggaggcgctc
accaccggcaccttcgccctggacctgcaacagcagcgtcaggatgtcacctccgcgatc
gaagctctcaccgacgaggtgacgaggtacatccaggcaaagaaaacgatccgggacctc
gaagaggaggaggtcgagaagaccttttcagccctgaacgccagaatcaaaacaaaacag
gggctccttgagcggaggaacgccaacgcggaagcgatccgatcggtcgaaactgatatt
ctggaccttgacaaagcgatcagaacaggagaggaagccctcgccgacgccgaggtgaaa
cttcaggaactttttgacctggagacgaccgcgaccaggcagcgggatgtcatccaggaa
cagcagcaggtgctggaccaactgcggcgggaggtggagtaccagaccagaaccagcgaa
gatctgaagaaggttatcctggagaaacgagcgaaggccggtacgatgcaggtcttccaa
gagcagcggcgatggctccgcgatcacttcctcccagccgtcgaatcgatcgaacgatcc
aggctggcccagatcaacgagaccttcaactgcttcttccagcaatggttcaccgacctg
atcgcagcggaggagatctcggtcagggtcgacgaagccttcaccccgctggtcgaacag
gacggctttgaggtggatgcagacagcctctcaggtggggagcggacctcgctggcgctg
gcctaccgattggccctgaacaccatcgtcagagatgagagcggggccgaccagaagtcc
ctgctgatccttgacgaaccgaccgacgggttcagcgccggtcagctctatcggctgcgg
gatatcctcctcgacgccggttgcgaccagttgatcatggtatcgcacgagaaagaactc
gaagggttcgtcgatacactctaccgggtcaccaaggtagacgggatatcctcagtcgtc
agacggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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