KEGG   Mycoplasmoides pneumoniae 309: MPNA5160
Entry
MPNA5160          CDS       T01712                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mpm  Mycoplasmoides pneumoniae 309
Pathway
mpm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mpm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MPNA5160 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpm03021]
    MPNA5160 (rpoB)
   03400 DNA repair and recombination proteins [BR:mpm03400]
    MPNA5160 (rpoB)
Enzymes [BR:mpm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MPNA5160 (rpoB)
Transcription machinery [BR:mpm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MPNA5160 (rpoB)
DNA repair and recombination proteins [BR:mpm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MPNA5160 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 Peptidase_M23
Other DBs
NCBI-ProteinID: BAL22093
Position
complement(627200..631375)
AA seq 1391 aa
MSQKPSFFQKKYSPTATRRYYGKIATDFVQPNLADIQIRSYQTFLDHDLENLIAAYFPIK
SPNDRYTINFKGLRRTAPERNEAQSRSESKTYEIGIYADLELIDSATGTIKKPRKSKKNS
ATSSVDGVFLTNLPLITRDGVFIVNGIEKFVIAQITRSPGIYMLTKSQLKLSSSRKRVQE
GYVCEVLPANGSVMLIYISNKKKIEDAFVQILLRDAVREGAKIFPITTLLKAFGMSGKEI
LKVFKNNEFITRSLEAEVYNAKDFLNNVDPEIKNLLREFRDGKTDLRRKGIASDQKIRSL
VSDYVLLEKEHKALSEAKPNDPKVGQLEADMDELMDKIITERAAKHIVHELSISLRGLEN
TDECPENSYHALLCSRFFRQRRYNLSAAGRYKVSRKLRITERIYQKTLACDLHLKNGELL
LKKGTLLVKEEIDKIKQAAQNNQIDFVQKIKLTTDGSAVNLSPESLLYESLDVYVNNDNF
DVSVPVVGIHNDNDLNKAITLSDFIASISYVINIPSAIGKYDDIDHLGNKRVKLINELIS
SRLESGITRMERFLKEKLTIADGVNRGQQINEEGQVIEQAEKKELTIKSLINSKPIQIVI
RDFFNTHQLTQFLDHQNPLSELSNKRRISAMGPGGISREDPNLDIRDVHYSQYGRICPIE
TPEGMNIGLIMSLASFAKIDENGFLMAPYRKIKNGVITDEVEYLTALREDEHIIAEISSL
VNIDENNKILDKEIIGRYRSMQGLYDPSKIDYIDVAPHQVVSIGSSLIPFLENDDSARAL
MGTNMQRQAYPLIKPYAPVVGTGQEYKIARDSGLTMLAPCSGTVKYVDNSKITIESDSGE
QHTLDLIKFERSNQNTCYNHVPLVEKGQRVTKDEVIADGPAVNKSELSLGQNVLVAFTTW
NGYNYEDAIVISERLVKDDVLTSLTINEYVAQCLSTKNGDEQITRDIPNVSDANKRYLDE
NGIIMVGAEVKEGDVLVGKVSPKGQVEVSPEEKLFKAIFPESVQNVRDSSLKLPHGGDGI
VSCVKRFSIANGNELNDGVIEMIKVYVVQKRKIQIGDKLAGRHGNKGVISKVVPVADMPH
LEDGTPVDILLNPLGVPSRMNIGQIFEMHLGYAAHNLAKRMLISACFDDKKAQALSTEIN
QPQYKLDRLITGLKAQITNRGLKDEQAALAQLNNGDIALVLKEIGMSFDDLHFKVATPIF
QGVNFQDLQDIMDEAGLKPAETHGKFKLIDGRTGLPFEKPISLGIMYMMKLNHMVDDKIH
ARAVGPYSKITQQPLGGKSQNGGQRFGEMEVWALEAYGAAYNLQELLTIKSDDVQGRNKA
YAAIVKGAAFPEPGIPESFKLLTKELQGLALSVSFIYDDNTQQDSNNVSILQADGEQDDL
FNDFEFDTEGY
NT seq 4176 nt   +upstreamnt  +downstreamnt
atgtcacaaaaacctagtttctttcagaaaaaatactcacccactgctacccgccgttac
tatggcaaaattgccactgattttgtgcaacctaatctggctgatattcagattaggagc
tatcaaacttttctagatcacgatctggaaaacctgattgctgcttattttccaattaag
tcccctaatgatcgttacacgatcaactttaagggtttgcgtcgtaccgctcctgaacgt
aatgaagcccaatcacgctctgagtccaagacctatgaaattggtatttacgctgactta
gaattaattgattccgctaccggaaccattaaaaagccgcgcaaatccaagaagaacagt
gccaccagtagtgtcgatggcgttttcttaactaacttaccattgattacccgcgatggg
gtctttattgtcaacgggattgagaagtttgtgattgcccaaattacccgttcaccgggg
atctacatgctcactaagtcccagttaaaattgtctagttcgcgtaaacgggtacaagaa
ggttatgtatgtgaagtattaccagccaacggttcggtaatgctgatctacatctccaat
aaaaagaagattgaagatgcctttgtgcaaatcttgctccgggatgctgtacgtgaaggg
gcaaagatcttcccgattaccaccttgctcaaagcctttgggatgagtggcaaggaaatc
ctcaaagttttcaaaaacaacgagtttattacccgttccttagaagcggaagtctacaac
gctaaggatttcttaaacaacgttgaccctgaaattaaaaacttattaagggaattccgc
gatggcaaaactgatctccgccgtaaggggattgcctctgaccaaaagatccgcagctta
gtgagtgactatgtccttttagaaaaggaacacaaagcgctcagtgaagctaaaccaaat
gaccctaaagtaggtcagttagaagcggacatggatgagttgatggataaaatcatcacc
gaacgggctgctaaacacattgttcatgaattgtccatttcactacgtggtttagaaaac
accgatgaatgtccggaaaacagttaccacgctttactgtgttcacgtttcttccgtcaa
agaaggtataacctctccgctgctggtcgttataaggtatcgcgtaagttaagaattacc
gagcggatttaccaaaaaacacttgcttgtgaccttcatttaaaaaacggggaactctta
ttaaagaagggcaccttattagttaaagaagaaatcgacaagattaagcaagctgcccaa
aacaaccaaattgactttgtccaaaagattaagttaaccactgatggtagtgctgttaac
ctttcccctgaatcgttgttgtatgaatcacttgatgtttatgtgaacaacgacaacttc
gatgtatccgtgccagtggtggggatccacaacgataacgatctcaataaggcaattact
ttaagtgactttattgcctcgattagttatgtgattaacatcccttcggccatcggtaag
tacgatgacattgatcacttaggtaacaaacgcgtcaagttaattaacgagttaattagt
tcccgtttggaaagtggaatcacccgcatggagcgcttcttaaaggaaaagctcacgatt
gctgatggagtgaaccgtggtcaacaaattaacgaagagggtcaagtaattgaacaagcg
gaaaagaaggaattgaccattaaatccttaattaattccaaacctattcaaattgtcatt
cgtgacttcttcaacactcaccagttgacccagttcttagatcaccaaaatccactttca
gaattaagtaataagcgccggatttccgccatgggtccagggggtatctcccgcgaagac
ccgaacttggatatccgggatgtgcactattcccaatatggtcggatttgtccaattgaa
acaccggaagggatgaacattggtttaatcatgtcgttggcttcctttgccaagattgac
gaaaacggattcctaatggcgccttaccgcaagattaaaaatggtgtcattaccgatgaa
gttgaatacctcacggcattaagggaagacgagcacattattgccgaaatctcttcgttg
gtcaacattgacgaaaacaacaagatcttagataaggaaattattggtcgttaccgctcg
atgcaagggttgtatgatccctcgaagattgactacatcgacgtggcccctcatcaggta
gtgtccatcggttcgtccttaattcccttcttggaaaacgatgactcagcgcgggcattg
atgggtaccaacatgcaacgccaagcctatcctttaattaagccttacgctcccgttgtg
ggtacaggtcaagagtacaagattgctcgcgactccggtttgacgatgttagcaccttgc
tcaggtacggtaaagtatgtagacaacagtaagatcacgattgaaagtgacagtggtgaa
cagcacactttggatctaattaagtttgaacgttccaaccaaaatacctgctacaaccac
gttcccttagtagaaaaggggcaacgggtaactaaggacgaagtgattgctgatggtcct
gcagttaacaagagtgagctgtctttagggcaaaatgtccttgtcgcctttacgacctga
aacgggtacaactatgaggatgcgatagtgatttccgagcgcttagtgaaggatgatgtt
ctaacctccttaacgattaacgaatacgtagcccagtgtttatcgaccaaaaacggtgat
gaacaaattacccgtgatatccccaacgttagtgatgctaacaagcgttacttagatgaa
aacggcattatcatggtcggtgctgaagttaaggaaggtgatgtccttgtcggtaaggta
tcccctaagggacaggttgaagtatcacctgaagaaaagctgtttaaggccattttccct
gaaagtgtgcaaaacgtccgtgactcttccttaaagctccctcatggtggtgatgggatt
gtgtcctgtgtcaagcgttttagcattgccaacggtaatgaacttaatgatggtgtcatc
gaaatgattaaggtctatgtggtgcaaaaacgcaagatccaaatcggagataagttggca
gggcgccatggtaacaaaggggttatctctaaggttgtcccagtagcggacatgccccac
ttagaagatggtactccagtcgacatcctcttaaacccactgggggtaccgagtcggatg
aatattggccaaatctttgaaatgcacttgggttatgcagcacataaccttgccaagcga
atgttaattagtgcttgttttgatgacaagaaggctcaagcactttcaaccgaaattaac
cagccacagtacaaacttgaccgcttaattactggtttaaaagcccaaattacgaaccgc
ggtcttaaagacgagcaggcagccttggcccaactcaataacggtgacattgctttagtg
ctcaaggaaatcggcatgagctttgatgacctccactttaaagtagcgaccccgatcttc
caaggggtgaacttccaagacttgcaagacatcatggatgaagcaggattgaaaccagcg
gaaacgcacgggaagttcaagctgattgatggtcgcactggtttaccatttgaaaaacca
atttccttgggaatcatgtacatgatgaagttaaaccacatggttgatgacaagatccat
gctcgcgctgtcggtccttactccaagattacccaacaaccattgggtggtaaatcacaa
aatgggggccaacgctttggggaaatggaagtgtgagccttggaagcttacggcgctgct
tacaaccttcaggaattacttaccattaagtccgatgatgtgcagggccggaataaggcc
tatgccgcgatcgttaagggcgctgccttccccgaaccaggtatccccgaatcgtttaaa
ctgttaacgaaggaactacaagggttagcgttgagtgtgtcctttatttacgatgacaac
acccaacaagattccaacaacgtttcaattctccaagctgatggagaacaggacgatctc
tttaatgactttgaatttgacacggagggttattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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