KEGG   Mycoplasmoides pneumoniae 309: MPNA5360
Entry
MPNA5360          CDS       T01712                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mpm  Mycoplasmoides pneumoniae 309
Pathway
mpm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MPNA5360 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpm03400]
    MPNA5360 (ruvB)
Enzymes [BR:mpm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MPNA5360 (ruvB)
DNA repair and recombination proteins [BR:mpm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MPNA5360 (ruvB)
    RecFOR pathway proteins
     MPNA5360 (ruvB)
SSDB
Motif
Pfam: RuvB_N RuvB_C AAA AAA_5 AAA_16 AAA_lid_4 Mg_chelatase bpMoxR DUF815 RNA_helicase AAA_2 nSTAND3 AAA_18 AAA_3 AAA_22 KAP_NTPase Sigma54_activ_2 Rad17 Sigma54_activat NTPase_1 AAA_17 AAA_14 RsgA_GTPase NB-ARC ABC_tran TsaE AAA_24 Cytidylate_kin AAA_19 AAA_28 NACHT ATPase_2 AAA_25 AAA_7 IstB_IS21 Zeta_toxin TIP49 DUF87 AAA_33 Parvo_NS1 Viral_helicase1
Other DBs
NCBI-ProteinID: BAL22114
Position
652415..653338
AA seq 307 aa
MKLQIKPPNNFAEFVGKQEIINQIQLSIKASRINKAQLDHILLYGPPGVGKTTLARLIAS
EMNTKLQIIQGGHLQRPSDFLNAVSLIKKGDVLFVDEIHAVAPSVMELMFPVMDDFRVQV
LIGKDFNSKMVEMKVNPFTLIGATTQFGKIINPLEDRFGMILNIDYYSNQEIERIVSIYG
EQMELELKPEEITQITQHSKQTPRIAIRIVKRLFEQKIVNKKIDLAALFKSLMIYKNGLQ
SIDVQYLKALNGQYEPQGIKSICSMLGIDKSTVENKIEPFLLRENMIQKTKKGRIITRTG
RNYLTSC
NT seq 924 nt   +upstreamnt  +downstreamnt
atgaagttacaaataaaaccgcctaacaatttcgctgagtttgtcggtaaacaagaaatt
attaaccaaattcaactcagcattaaagcgtcccgtatcaataaggcgcagttggaccac
attcttttatacggtccacctggcgttggtaaaaccacattagctcgcttaattgcgagt
gaaatgaacaccaaactgcaaattattcagggtgggcacttacagcgaccgagtgatttt
ctcaacgccgtttccctcattaaaaagggtgatgtactgtttgtggatgaaatccatgca
gtagcacccagtgtgatggagttaatgtttcccgtgatggatgattttcgcgtccaagtc
ttaattggcaaggactttaattccaagatggtggaaatgaaagttaatccgtttacctta
atcggagccaccactcagttcggtaagattatcaacccgctggaagatcgctttgggatg
atccttaacattgactactacagtaaccaagagatcgagcggattgtaagcatctatggt
gagcaaatggagttggaattaaaaccggaagaaattacccagattacccaacacagtaag
caaaccccgcggattgccattcgaattgtcaagcgtttgtttgaacagaaaatagtcaac
aaaaagattgatctggctgctctgttcaaaagcttaatgatttacaaaaatggtttacag
agcattgatgtgcaatatctcaaagcactcaacgggcagtacgagcctcagggtattaag
tcaatttgttcgatgctagggattgataaatccactgtcgaaaacaagattgagcccttc
ttgctgcgggaaaacatgatccaaaagaccaagaaagggcggatcataacccgcactggg
cgtaattatttaactagctgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (41)   
   Pfam (41)   
All databases (50)   

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