KEGG   Mycoplasmoides pneumoniae M129: MPN_034
Entry
MPN_034           CDS       T00006                                 
Symbol
polC
Name
(GenBank) DNA polymerase III (dnaE) alpha chain
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
mpn  Mycoplasmoides pneumoniae M129
Pathway
mpn03030  DNA replication
mpn03430  Mismatch repair
mpn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MPN_034 (polC)
   03430 Mismatch repair
    MPN_034 (polC)
   03440 Homologous recombination
    MPN_034 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpn03032]
    MPN_034 (polC)
   03400 DNA repair and recombination proteins [BR:mpn03400]
    MPN_034 (polC)
Enzymes [BR:mpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MPN_034 (polC)
DNA replication proteins [BR:mpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MPN_034 (polC)
DNA repair and recombination proteins [BR:mpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MPN_034 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP HHH_6 RNase_H_2 DUF655 HHH_3 T2SSK Zn-ribbon_8
Other DBs
NCBI-ProteinID: AAB95768
UniProt: P75080
Position
complement(36800..41131)
AA seq 1443 aa
MVFDTETEKGKRIWALSQFLVKKNILDHNELHQLNNRIELVYLENDRENALFLVALTLKK
PLTIDIWNALYEGFQDAEGAELRITFQEDATFFKDGSTKSSVTLAIIKDYFKSFFGKDKK
YRILLEQELTHPNFLSYSNHELKANCQSQELDQWLIEQRQAFIKWMHQAGFTHFGFVSLF
NPPAEKQLKVKSMKVSKYDKQFETEVFSTEFVPIHKINQQMDEIKLMGQIFELKDFPGYN
NLRNTLNIYVTDFQLGGSLILKWFYKDPKTIEGIKIGTWVKATVKVERDAKTQLLQGIIK
EISPIETPAYYRRPDQDKQKRVELVFHTKMSAFDGINSVQEYAQFAKERDWKTIAVTDKD
NIHIYPTLYEVAKKYGLKAIYGLECNLIDDHIKIVSNPDKTKLKDATFVIFDIETTGLHG
RYDSVIEFAGIKVKHNREVERMQFFLKIDGPLPAAVTEITKITQAQLEDGMEQQAGLEKL
RAWLDGCVMVAHNGLSFDLPFLQTQFEKYNIAPLTNPLIDTLALSWALNPGFASHTLSNI
CAKLKFDFDDERLHRADYDTQALKKVFDYFKEQVELMGITNLEQLDQELNQQCHFELLKR
TFTNTGIIYIKSQSGFAKLYELLSIALTDNNATRPLVLTSTLQKFAKSFVITDNPVQGDI
FKAALTKPLKELEAAIKRVDFVLIAPPGAYAGYTIREGLKKEAIPNAIKLVVDTAQRLNK
LVAVASDAYFIHPWENEYYKAIVCAKGLGGRWHRHFNYKEREQRVPNVFVRTTGEMLNEM
SFLGEQLAYELVVENTNKLAKQLTADDLVPVQTKLQPPVIEGSNENLAAKTWSQAKAIYG
DPLPKLIEQRIQEELKAIIDNGFGIIYWISHLLVKQSVQDGYFVGPRGSIGSSLVANLIG
ISEINPLVPHYLCESCQYFEVNEEVDDGYDLMVRDCPKCGAKAAFKGDGHNIPFATFMGF
AGDKIPDIDLNFSSEYQAKAHAYVRELFGEQYTFRAGTIATVAEKTAYGYARNYFEIIKQ
TELATAPEIERFKQKLVGIKRTTGQHPGGIMIFPNHKSVYEFTPCGYPADDTSSDWKTTH
FEYDALGNTILKLDILGQDDPTMLKHLGDLTHVNPQNIPRFDKKLTEMFWSVNPLKLKPH
YLDEPTGAIGIPEFGTKFVRKILEQTKPKGFGDLIRVSGLSHGKNVWADNAQKILKDQNL
SLKDVIACRDDIMLYLIHKGMQAKDAFEIMEKVRKGIALNAKEVQLMQSNGVEQHWINSC
LKISYLFPKAHAAAYVLMAWRIAWFKLYHPLSYYACLLSFKLKEHDVSGFKSGVSFVKQK
LEELNTLYRIKRIKPKEAELLTSYEVYLEMMARGIKLEQISLTHSHATRFVEHNGMLIAP
FITIPGMGEAVANSIIEARNEKPFSSLDDFKKRTKITKKHIEAFTQMQLLDEFREQDNQK
KLF
NT seq 4332 nt   +upstreamnt  +downstreamnt
atggtattcgacaccgaaaccgaaaagggtaaacgcatttgagcattatcacagttttta
gttaagaaaaatattctcgatcacaacgaattgcaccaactcaacaaccggattgaactg
gtttacctcgagaatgatcgcgaaaacgccctgtttctcgtggcgctcactttaaaaaaa
ccgttaacaattgacatttgaaacgccctgtatgagggctttcaggatgcggaaggggca
gaactgaggattaccttccaagaagatgccaccttctttaaggacgggtccactaagtcc
agtgtcaccttagccattatcaaagactacttcaaaagcttctttggtaaggacaagaag
taccgcatcctgttagagcaagagttaacccatcctaacttcttgtcctacagtaaccat
gaactgaaagctaactgccagtcccaagaattagaccaatggttaattgaacaacgccaa
gccttcattaagtggatgcaccaagctgggtttacccactttggttttgtctcgttgttt
aatccaccagcggaaaaacaactaaaagtgaaatcaatgaaggtatccaagtacgacaag
cagtttgaaaccgaggtctttagtacggaatttgtccccattcacaagattaaccaacaa
atggatgagatcaaactaatggggcaaatctttgagttaaaggactttcctgggtacaac
aacctccgtaatacccttaatatttatgtcactgatttccaactaggtggttcgttaatt
ttgaagtggttttacaaggatcccaaaacaattgagggcattaagattggtacctgagtt
aaggccacggttaaggtcgaacgtgatgccaagacccaactactccagggtatcattaag
gaaatttccccgattgaaacccccgcttactatcgccgccccgatcaggacaaacaaaaa
cgggtcgaattagttttccacaccaagatgagtgcctttgatggcattaacagtgtccag
gaatacgcccagtttgccaaagaacgcgattggaagacaattgctgtcactgacaaggac
aacattcacatttatcccactttatatgaagtggccaaaaagtacggcttgaaggccatt
tatggtttggaatgtaacctcattgatgatcacattaagatagttagcaatcctgataaa
accaaacttaaggatgcgacctttgtcatcttcgacattgaaacaactgggttacacggt
cggtatgactcggtgattgagtttgcgggaattaaggtcaaacataaccgtgaagtggaa
cgaatgcagttctttctcaagattgatggacccttacctgcagcagttaccgaaattacc
aagattacccaagcacaactagaagatgggatggaacagcaagcggggttggaaaaactg
cgcgcttgactagatggttgtgtaatggtagcccataacggtttgagttttgacttgccc
tttttacaaacccagtttgaaaaatacaacattgcgccactaaccaatcccttaattgat
accttagccttatcctgggccttaaatcccgggtttgcctcccatacgttgagcaatatt
tgtgccaagctcaagtttgactttgatgatgaacgattgcaccgagcggattatgatacc
caggccttaaaaaaggtctttgactacttcaaggaacaggtcgaactcatggggattact
aatctcgagcagttagaccaagagttaaaccagcagtgccactttgaactgctcaagcgc
acttttaccaataccggcattatctacattaagagccaaagtgggtttgctaaactgtat
gaactgttatcaattgcgctcaccgataacaacgctactcgacccctagtgttaacttca
acactccaaaagtttgctaaatcctttgtcattactgataacccggtgcaaggtgatatc
tttaaagcggcattgactaaaccgcttaaagaattagaagcggccattaaaagagttgac
tttgttttaattgccccacctggtgcttatgctggttacaccatcagggaaggtttgaaa
aaagaagccattcctaacgcaattaagttagtggtggacacggcccaaagactcaataag
ttagtggcagttgcctcggatgcttactttattcacccctgggagaatgagtactataag
gccatagtttgtgccaagggtctgggtgggcgttgacaccgtcactttaactataaggaa
agggaacaacgggttcccaatgtgtttgtgcgtaccacaggggaaatgctcaatgaaatg
agttttttaggcgaacaattagcttacgagttagtggtcgaaaacaccaataagttagcg
aaacaactcaccgctgatgacctggtaccagtgcaaaccaaactccaaccaccagtaatt
gaaggttctaacgaaaacctggcagccaaaacctggagtcaagccaaggccatttacggt
gatcccttacctaagttaatagaacaacggatccaggaagagttaaaagcgatcattgac
aatggctttggcattatttactggatttcccatttactagtcaaacaatcggttcaagat
ggttactttgttggaccgcggggttcaattggttcttcgttggtagctaacctgattggt
atctcggaaattaatcccttagtgccgcattatctctgtgagagctgtcagtactttgag
gtcaacgaagaggtcgatgatgggtatgacctcatggtaagggattgtccaaagtgtggt
gccaaagcagcctttaagggtgatggtcataacattccctttgctacctttatgggtttt
gctggggacaagattcccgatattgacttaaacttttccagtgagtaccaagccaaagcc
catgcttatgtgagggaactgtttggtgaacagtacaccttccgtgctggcacaattgcg
acagtggccgaaaaaacggcttacgggtatgcgcgcaactactttgaaattattaaacaa
accgaattggccaccgctcccgaaattgaacgctttaagcaaaagttagtcgggattaaa
cgcacgaccggccaacaccccggggggattatgatcttccccaaccacaaatcggtatat
gagtttaccccgtgtggttatccagctgatgatacttccagtgattgaaaaacgacccac
tttgaatatgatgcgttagggaacaccatcttaaagttagatattctgggccaggatgat
ccgactatgttaaagcacctgggcgatcttacccatgtcaatccacaaaacattccccgg
tttgacaagaagctcaccgaaatgttttggtcggtcaatcccttaaaactaaaaccgcac
tacttagatgaacccacgggagcgattgggattcccgagtttggtactaagttcgttcgc
aagatcttggaacaaaccaaaccaaagggctttggtgacctcattcgcgtctcgggtcta
agtcacgggaagaacgtgtgggcggacaatgcgcagaaaatcttgaaggaccaaaactta
agcttaaaggatgtaattgcctgtcgcgatgacattatgctctacctcattcataagggg
atgcaggccaaagatgcttttgagatcatggaaaaggtgcgtaagggaattgctctcaat
gccaaggaagtgcagttaatgcagagcaatggggtcgaacaacactggattaattcgtgt
ttaaagattagctacctgttcccgaaagcccacgccgcggcttatgttttaatggcctga
cgaattgcctggttcaaactgtaccacccgttgagctactatgcttgtttgttgagcttt
aaactcaaggaacatgatgtcagtggttttaaatcaggtgtgagctttgtcaagcaaaaa
ctagaggagctcaacacactgtaccgcattaaacggattaaacccaaagaagcagaactg
ttaaccagttacgaggtttatttagagatgatggcccgcggcattaaactagaacaaatc
tctttaacccactcccacgccactcgttttgtcgagcacaacggcatgctaattgcccct
tttattacgattccggggatgggggaagctgtggccaattcgatcatagaagcgcgtaac
gaaaagccctttagttcgctcgatgactttaaaaaacgcactaaaattaccaaaaaacac
attgaagcgtttacccaaatgcaactactcgatgagtttagggagcaagacaaccagaaa
aaacttttttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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