KEGG   Micromonas pusilla: MICPUCDRAFT_40164
Entry
MICPUCDRAFT_40164 CDS       T02696                                 
Symbol
JGI:MicpuC2_40164
Name
(RefSeq) uncharacterized protein
  KO
K12115  clock-associated PAS protein ZTL
Organism
mpp  Micromonas pusilla
Pathway
mpp04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    MICPUCDRAFT_40164 (JGI:MicpuC2_40164)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpp04121]
    MICPUCDRAFT_40164 (JGI:MicpuC2_40164)
Ubiquitin system [BR:mpp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     MICPUCDRAFT_40164 (JGI:MicpuC2_40164)
SSDB
Motif
Pfam: Kelch_4 Kelch_5 Kelch_3 Kelch_6 Kelch_1 Kelch_2 F-box-like F-box F-box_4
Other DBs
NCBI-GeneID: 9684598
NCBI-ProteinID: XP_003059158
JGI: 40164
UniProt: C1MU98
Position
Unknown
AA seq 542 aa
MTPANAQSTGWVRDGSGRMMRAEDATAENMEPSQLLRLPCHVLREVFGFLDAKDVARAAT
TCSTLREVNRSESLWRRMLASKLGTQAEIVLPRALPDERYNAGESKDEPAWKDMFRFWMN
PKPNSLEWAEKARGEDLESSRGKFAARYLHRCTAIGDGNKILLFGGQGSGADFFNDLHLL
DLKKTPLSLEEVHASGDPPFPRCSGTLTAVGVDGLPGVEVVALFGGSQGFFEGFSNSLCI
LQGDDGVSIENAAESHRGLTWKEPKVVAENALDGVPDARWGHSAVSWNGNLVLFGGSNTQ
HCFNDTWILNVSADEEDPKRLLATWRLLKLASDVRPPSRAGQTVSIVNDSLYVFGGCHIS
DVFNDLWTLDLNSPNPTWREFHVKGTPPAPRVGHAAVVLGDRVVFSGGRGSPTAGAFGTY
ATADQGLATMQGLTFFEGGFAMLDISRECWMPIQHPIRDGKRGVAFRGGGGDGPTPMDVD
GEENDFHMPGLGMDDLEEGADQGVWEHRTGHVMVPAKDGLLVIGGLAYSGDFQNDVQHIK
VF
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgaccccagcgaacgcgcaaagcaccgggtgggtgcgagacgggagcggacggatgatg
cgcgcggaggacgcgaccgcggagaacatggagccgtcgcagctcctgcgcttgccgtgt
cacgtcctgcgcgaggtgttcggtttcctggacgcgaaagacgtcgcgcgcgcggcgacg
acgtgcagcaccctgcgggaagtaaaccgctcggagtcgctgtggagacgtatgctcgcg
agcaaactcgggacgcaggcggaaatcgtcctgccgagggcgctcccggacgagcggtac
aacgccggggaaagcaaggatgaacccgcgtggaaagacatgtttaggttctggatgaac
ccgaaaccgaactcgttggagtgggcggagaaggcgcggggcgaagacctcgaaagctcg
cgcgggaagttcgcagcgcggtacctgcaccgctgcaccgccatcggggatggaaacaag
atcctcctgttcggcggtcaaggcagcggcgcggacttcttcaacgacctccacctcctc
gacctgaagaagacgccgctcagcctcgaggaggtgcacgcgtccggggacccgccgttt
ccgcgatgcagcggcacgctcaccgccgtgggcgtcgacggcttacccggcgtggaagtc
gtcgcccttttcggcggttcacaaggattcttcgagggcttctcgaactcactgtgtatc
cttcaaggcgacgacggcgtctcgattgagaacgccgcggagtcgcaccgggggttaacg
tggaaggagccgaaggtcgtcgcggaaaacgcgctcgacggcgtcccggacgcgcggtgg
gggcacagcgcggtgtcttggaacgggaatctcgtcttgttcggcggctcgaacacgcag
cactgcttcaacgacacgtggatcttaaacgtcagcgcggacgaggaagacccgaagcgg
ttgctcgcgacgtggaggctgttaaagctcgcgtcggacgttcgaccgccgtcgcgagcg
gggcagacggtgtccatcgtgaacgactctctgtacgtgttcggcgggtgccacatctcg
gacgtgttcaacgatctttggaccctagatctgaactcgccgaatccgacgtggagggag
tttcacgtcaaaggcacgccgccggcgccgagggtggggcacgccgcggtcgtcctcggc
gaccgcgtcgtgttcagcggcgggagggggtcgccgacggcgggcgcgtttggaacgtac
gccaccgcggatcaaggtctcgcgacgatgcaaggactgacgttcttcgagggcgggttc
gcgatgctggacatctcgagggagtgctggatgccgatccagcatccgattcgcgacggg
aaacgcggtgtcgcgttcagaggaggcgggggggacggtccgacgccgatggacgtggac
ggcgaggaaaacgatttccacatgccggggctcgggatggacgatctcgaagaaggcgcg
gaccagggggtgtgggagcaccggaccgggcacgtgatggtgcccgcgaaggacgggttg
ctcgtcatcggcgggttagcgtacagcggggattttcagaacgacgtgcagcacatcaag
gtgttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (60)   

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