KEGG   Micromonas pusilla: MICPUCDRAFT_49885
Entry
MICPUCDRAFT_49885 CDS       T02696                                 
Symbol
JGI:MicpuC2_49885
Name
(RefSeq) helicase/polymerase domain-containing protein
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
mpp  Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpp03400]
    MICPUCDRAFT_49885 (JGI:MicpuC2_49885)
Enzymes [BR:mpp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MICPUCDRAFT_49885 (JGI:MicpuC2_49885)
DNA repair and recombination proteins [BR:mpp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    MICPUCDRAFT_49885 (JGI:MicpuC2_49885)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical DEAD Helicase_C HTH_61 HHH_5
Other DBs
NCBI-GeneID: 9680763
NCBI-ProteinID: XP_003055354
JGI: 49885
UniProt: C1MGP1
Position
Unknown
AA seq 1996 aa
MLSSVASTRSLFVAHHAAPLASPPFRARRRKPLSTANRGPSPTGTCYDIVTGVAVAETSD
SLSKRPRSVANESQGSGDVPAPPPLRGPRRSFSETPSSDEKAALIDAYLAGEQYVEAVET
WENIGSKEWAEAEAARRAASVGATATATATATVVAPTSAAATAMDDKKTTVVVAGPHHAA
VAELLNGDFDIDEAMSPIGCKAAPLRPTRGTGTAPGGGRARGFVAAAVAAAAAAPRGARE
SVLAPRYLSYGAGRESASAGGAGSTPSPREASSLAPSARTTAPPAPPPPRHRPPPHPPPD
AETSMTSQGLPEPVVEYYRDEKNITRLHAWQAECLSTPGVSDGGKNLVYCAPTSGGKSIV
ADILLMKRLVADGFGGKRREKNAVAADRGGNLAIIVLPFISLCDERANELAKLLKLIHVD
VKRFYGGRGGALPPRDSKERVLLVCTPEKANDVVSKLIEDDRVRDLAAVVVDELHMVQDE
SRGSTLELMLTKLLFASSKAAAAAIAAENVSPSSDGGDGGKGAGSREPLSASSRGSKSAA
AAAAAAKRTPQIIGMSATLPNVDGLAKWLDDAALYVTDYRPVALRLSIKLGSDVYPLPSR
EEEVEDGEDDDVLSERRKVSLKDGDDASHVAQLAQETMDRGAVGGGVIVFCSAKFQCEVM
ARMLSKKLRVDADARASDGLDRISASLRNVNPNATDTANRPALATTVANGVAWHHAALHA
EEKRLVEDGFRSGAIRVICCTSTMAAGVNLPASRVIIAHPYIYRQKPARHALLSSRDLKQ
AAGRAGRAGLADRGEAFVVVPEPSEIDCDFAAGGGGGGGGGKSKAKSKAALARELARRLL
SEGDALSSTIAGERMRRVMLEALAGGLVKSARDVQCYIQCTLLNALNDFQEVTARGAKDA
LAWLAQRGFMSWNEKTAEYTPSPLGRAAAAGRFEPDEAAAVVDVVKRARRGLNLESDLHL
LFLCVPPDPPAPMDVDADGGGGGARAAKDDPLSPASIVAARNKPVAPPKTDTTCRLNPTA
FVSVYDNLTEHEHDVATRCGVLDSYARQLKMSKRDKTPEDRASRRVCHRFMKALQLRDLV
AERDVADIARAFSENGKDANVNGFASYLAQLQEQAVRYAGQVAALCGPMGWGDVEVLLAR
LQDRIAAGAREEIVSLTQIPMISAGRARALYNAGYRSPEAILRLDQKKLAGVLKQCRGAR
GGEMKAAAIILRGARALCAEARRLAREESEAKLKELEALPAIDADADADAAVDDDDDAEA
EEAMREVDVADLLRSASSFDLERARGCVVVRDAVAVDALHARWSSSEFYAFVLQPSAKRD
APPVGIALSFPFNPLAVFYAPIVHGAGGGGATRGLPWTRVRDVLSRSGVGKVTVDLKPQL
RAMGAGATIAAPVVDVKIAAWVLHPDEELLKYSSQTGWDALNAVDPDRARGPCAGMLERF
AGDVDADAIRAASKWRGPRATADGVNAGGANAAFAVASALSLDALVRAKLADPRAPSGLE
DALRAIEMPLVPVLASMERAGVAFAPATLSRQLRRATKRVREIETEAVAVVATHFACRHP
GMAPPEFNLASSDDVARVLFDAPPAGLGAEPPRGAKPTAARGRRSTRQDDLLALVREQGG
PIAAFPKLVLEHRSLRKLLDEANEFGRLAKSELGGDAAAAADESVTIRLRGVIHQTNTGT
GRLAMEDPNLQCVPRPREFALSRAYPERLSASGRVSPGTDAGAEETLAIRNAFRAPRGKK
LIAFDYKQIELRVIAHLSCDRGLIAALCVRSVDPFKVIAARWKGDGTTPKNVSDEDRAKA
KELCYGICYGAGVGRYQQAMGVTELEARAAIEDFKRSLPGVERWKSALVKDARERTPPHV
RTIAGRCRFLPSLNATGAGGEIRAADERKAINTACQGSAADIVKRVMIELHAKLTSGGGA
DDDDEWAPLREVDACEMVLQVHDELLFEVDERKVDVAVRAIRGVMERAREVHDMKVPLPV
RVSVGDDWGRLREVNG
NT seq 5991 nt   +upstreamnt  +downstreamnt
atgctttcgtccgtcgcgtcgacgcgttcacttttcgtcgctcatcacgccgctccgctc
gcctccccgcccttccgcgcgcgcaggagaaaaccactgtcgaccgcgaaccgcggcccg
agcccgacgggaacgtgctacgacatcgtcaccggcgtcgccgtcgcggagacgagcgat
tcgctgagtaaacgcccgcggtcggtcgcgaacgagagccagggcagcggcgacgtcccc
gcgccgccgccgcttcggggaccgcggcgcagcttctcggagacgccgtcctcggacgag
aaagcggcgctcatcgacgcgtatctcgcgggtgagcagtacgtcgaagccgtggagacg
tgggaaaacatagggagcaaggagtgggcggaggcggaggcggcgagacgagccgcgagc
gtaggcgcgacggcgacggcgacggcgacggcgacggtcgtcgccccgacgtcggcggcg
gcgacggcgatggacgataagaaaacaactgtcgtcgtcgcggggccgcaccacgccgcc
gtcgcggagctcctgaacggcgacttcgacatcgacgaggcgatgtcgccgatcggatgc
aaagccgcgccgcttcgaccgacgcgggggacggggacggcgccgggaggagggcgagcg
cgcggcttcgtcgccgccgccgtggcggcggcggcggcggccccgcgcggcgcgcgcgag
agcgtcctcgcgccgcggtatttgtcctacggcgcggggcgagagagcgcgagcgcgggc
ggcgcggggtcgacgccgtcgcctcgagaggcgtcgtcgctcgcgccgtcggcgaggacg
accgcgccgccggcgcctccgccgccgcgtcatcgtcctcctccccatccccctcccgat
gcggagacgtcgatgacgtcgcaggggctccccgagccggtcgtggagtattaccgcgac
gagaagaacatcacgaggttgcacgcgtggcaggcggagtgcctctcgacgccgggcgtg
tccgacggcggcaagaacctggtgtactgcgcgcccacgagcggagggaagtcgatcgtc
gcggatatacttctcatgaaacgcctcgtcgctgacggtttcggcgggaagcgtcgcgag
aagaacgccgtcgccgccgaccgcggcggcaacctcgcgatcatcgtcctcccgtttatc
tccctgtgcgacgaacgcgcgaacgagctcgcgaaactcctgaagttgatacacgtcgac
gtgaagcggttctacggcggcagaggcggcgcgctgccgccgcgagactcgaaagagcgc
gtcctcctcgtgtgcaccccggagaaggcgaacgacgtcgtctcgaaactcatcgaggac
gaccgcgtgcgcgacctcgccgccgtcgtcgtggacgagctgcacatggtccaagacgaa
tcccgcggcagcacgctggaactgatgctcacgaagctcctgttcgcgtcgtcgaaagcc
gcggcggcggcgatcgcggcggagaacgtgagcccgagctcggacggcggcgacggcggg
aagggcgcgggatcgagagagccgctgagcgcgagcagccgcgggagtaaatccgcggcg
gcggcggcggcggcggcgaagcgaacgccgcagatcatcggcatgagcgcgacgctgccg
aacgtcgacggcctcgcgaagtggctcgacgacgccgcgctgtacgtcacggactacagg
cccgtcgcgctgcggttgtcgatcaagctcggaagcgacgtgtatcctttaccgagtcgc
gaggaggaggtggaggacggcgaagacgacgacgtcttgagcgagcgaaggaaagtatcg
ctgaaggacggcgacgacgcgtcgcacgtcgcgcagctcgcgcaggagacgatggaccgc
ggcgccgtcggcggtggcgtcatcgtgttctgcagcgcgaagtttcagtgcgaggtcatg
gcgcggatgctctcgaagaagctgcgggtcgacgcggacgcgcgcgcttccgacgggctc
gatcgaatttccgcgtcgttgcgaaacgtcaaccccaacgcgacagacaccgcgaaccgt
ccggcgctcgcgacgacggtcgcaaacggcgtcgcgtggcaccacgccgcgctacacgcg
gaggagaagcggctggtcgaggacgggttccgatcgggcgcgatcagagtgatttgctgc
acgtccacgatggccgccggggtgaacctcccggcgtcgcgcgtgatcatcgcgcacccg
tacatttaccgccagaagcccgcgcggcacgcgctgttgtcctcgcgcgacttgaagcaa
gccgcggggcgcgcggggagagccggactcgcggaccgcggcgaggcgttcgttgtcgtg
ccagagccgagcgagatcgattgcgactttgccgccggcggcggcggcggcggcggcggc
gggaaatcgaaagcaaagtccaaagccgcgctcgcgcgcgagctcgcgcggcgactcctc
tccgaaggcgacgcgctgtcgtccacgatcgcgggcgagcgcatgcgacgcgtcatgctc
gaagcgctcgcgggagggctcgtgaaatccgcgcgcgacgtgcagtgctacattcagtgc
acgcttttaaacgcgttgaacgatttccaagaagtcaccgcgcgcggcgcgaaggacgcg
ctcgcgtggctcgcgcagagagggttcatgtcctggaacgagaagacggcggagtacacg
ccgtctccgctcgggcgcgccgcggccgcgggccggttcgagccggacgaggccgccgcg
gtcgtggacgtcgtcaaacgcgcgcgtcgggggttaaacctcgagagcgacttgcacttg
ctgtttctgtgcgttccgccggacccgcccgcgccgatggacgtcgacgcggacggcggc
ggcggcggcgcgagagcggcgaaggacgatccgctgtctcccgcgtcgatcgtcgcggcg
aggaataagcccgtggcgcctccgaagacggacacgacgtgtcggctgaaccccacggcg
ttcgtctccgtgtacgataacctcacggagcacgagcacgacgtcgcgacgagatgcggc
gtgctggactcctacgcgaggcaactgaagatgagcaagcgcgataagacgcccgaagac
cgagcgtcgcgccgcgtctgtcaccgcttcatgaaagcgttgcagctgagagacctcgtc
gccgaacgcgacgtcgcggacatcgcgcgcgcgttttcggaaaatggcaaagacgcgaac
gtgaacggcttcgcttcgtacctcgcgcagctgcaagagcaggccgtgcggtacgccggg
caggtcgcggcgctgtgcgggcccatgggctggggcgacgtggaggttttactcgcccgc
cttcaagatcgaatcgccgccggcgcgcgcgaggaaatcgtgagcctcacccaaattccg
atgataagcgccgggagagcgcgcgcgctgtacaacgccggctaccgctcccccgaggcg
atcctccgtctggaccagaagaagctcgccggcgtgctgaaacagtgccgcggcgcgcgc
ggcggggagatgaaggccgcggcgatcatcttacgaggcgcgcgggcgttgtgcgcggag
gctcgtcgactcgcgagggaagagtccgaggcgaagctaaaggagctcgaggcgttgcct
gcgatcgacgccgacgccgacgccgacgcggccgtggacgacgacgacgacgcggaggcg
gaggaggcgatgcgagaggttgacgtcgcggacctccttcggtccgcgtcgtcgtttgat
ctcgaacgcgcgcgcggatgcgtcgtcgtgcgcgacgccgtcgccgtcgacgcgttgcac
gcgcgctggtcttcctcggagttttacgcgttcgtgcttcagccgagcgcgaagcgcgat
gccccgccggtcgggatcgcgctgtcgtttcctttcaacccgctcgcggtgttctacgcg
ccgatcgtgcacggcgccggcggcggcggcgccacgcgcgggctgccgtggacgcgcgtg
cgcgacgtcctctcgcgctcgggcgtcgggaaagtcaccgtggatttaaagccgcagctt
cgcgcgatgggcgcgggcgcgacgatcgcggcgccggtcgtggacgtgaagatcgccgcg
tgggtgttacatcccgacgaggagctccttaagtattcttctcagaccgggtgggatgcc
ctgaacgcggtcgaccccgatcgcgcgcgcgggccgtgcgcggggatgttggaacggttc
gccggcgacgtcgacgcggatgcgattcgcgcggcgtccaagtggcgggggccgagggcg
accgcggacggcgtcaacgccggcggcgcgaacgcggcgttcgccgtcgcgtccgcgctc
tcgctcgacgcgctcgtgcgcgcgaagctcgcggacccgcgcgcgccgagcgggctcgag
gacgcgttacgcgcgatcgagatgccgctcgtcccggtgttggcgtcgatggagcgcgcg
ggcgtcgcgttcgcgccggcgacgctctcgcggcagctgcgtcgcgcgacgaaacgcgtg
cgcgagatcgagaccgaggcggtcgccgtcgtcgcgacgcacttcgcgtgccgccacccc
gggatggcgccgccggagtttaacctcgcgagctcggacgacgtcgcgcgcgtgctgttc
gacgcgccgccggcgggcctgggcgccgagccgccgcgcggcgccaagccgacggcggcg
cgcggacggcggagcacgcgccaggacgatttactcgcgctcgttcgcgagcagggggga
cccatcgcggcgttcccgaagctcgtgctcgagcatcggtccctgcgcaagcttctcgac
gaggcgaacgagtttggacggctcgcgaagagcgagctcggcggcgacgcggcggcggcg
gcggacgaatccgtcacgattcgtctccgcggcgtcatccatcagacgaacaccgggacc
gggcgcctcgcgatggaggacccaaacttacagtgcgtcccgcggccgagggagttcgcg
ctgtctcgcgcgtaccccgagcgtctcagcgcgagcgggcgcgtgagccccgggacggac
gccggagcggaggagacgctcgcgattcgaaacgcgtttcgagcgcctcgcgggaagaag
ctcatcgcgttcgattacaagcagatcgagctcagggtcatcgcgcacctttcttgcgac
cgcgggttgatcgccgcgctgtgcgtgcgaagcgtggatccgttcaaggtgatcgccgcg
cgatggaaaggcgacgggacgacgccgaagaacgtgtcggacgaggaccgagccaaggcg
aaggagctgtgttacgggatttgctacggcgccggcgtcgggagataccagcaagcgatg
ggggtgaccgagctcgaggcgcgcgccgcgatcgaggacttcaagcgctcgctccccggg
gtcgagcgctggaagtccgcgctcgtgaaggacgcgcgcgagcggacgccgccgcacgtt
cggacgatcgccgggcgatgtcgttttttgccgtcgctgaacgcgacgggcgcgggcggg
gaaatccgagccgcggacgagcgcaaggcgataaacaccgcgtgccaaggctccgcggcg
gacatcgtgaagcgggtcatgatcgagctgcacgcgaagctcacgagcggcggcggcgcc
gacgacgacgacgagtgggcgccgttgcgagaagtggacgcgtgcgagatggtgttacag
gtgcacgacgagcttctgtttgaggtggacgagcgcaaggttgacgtcgcggtgcgcgcc
atcagaggcgtgatggagcgcgcgcgcgaggtgcacgacatgaaggtgccgctgcccgtg
cgcgtcagcgtcggggacgactgggggcgactccgggaggtgaacggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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