KEGG   Marinomonas primoryensis: MP3633_1742
Entry
MP3633_1742       CDS       T06705                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mpri  Marinomonas primoryensis
Pathway
mpri02020  Two-component system
mpri02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mpri00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MP3633_1742
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MP3633_1742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpri03021]
    MP3633_1742
Transcription machinery [BR:mpri03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MP3633_1742
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: QKK80471
UniProt: A0A859D151
Position
KMM3633:complement(1861469..1862947)
AA seq 492 aa
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLKQEIHEFLESNPLLELDDDEQIHNDQP
ASIESKSAPEATLDSNSEEARVESEWTESIPEELSIDSSWDDTYQSSAAAVSDHNSYEGE
SDFESRNAPAESIQDHLIWQLNLTHISDRDIEIAYAIIECVQTDGYLSISTQDIWESLCV
ELEDLDMEEVIAVQHRLQRFDPVGVCSIDLRDCLLVQLEAFQSHPLYKSTHNLIDHYLPL
LGNRDFAQLSRKTKLKDEALKEVVNLIQQLNPRPGSVIDADDTDYVIPDVSVKKHNGIWQ
VELNNDALPPIKINETYSAMASTAATTAADVSYIKTSLQEAKWFMKSLQSRNETLLKVAS
CIVSRQIDFFELGEEAMKPMVLHDVAEEVGMHESTISRVTTQKYMHTPKGIFELKYFFSS
HVNTASGGECSSTAIRAMIKKLVADEPAKKPLSDNKLAAVLADQGIQVARRTVAKYREAM
NIPPSNERKRLI
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgaagcagtctttgcaactaaaactcggccaacagctgaccatgacaccacagctacaa
caagccattcgcttgctgcagctttccacgttggacctgaagcaagaaattcatgaattt
ctcgaatctaaccctcttcttgagctagatgacgacgaacaaattcacaacgatcaacct
gcaagcattgaatcaaaaagcgctcctgaggcgacacttgatagtaatagtgaagaagcg
cgcgttgaatcagagtggactgaaagcattcctgaagaactgtctattgacagcagctgg
gatgacacataccaaagctctgctgcggccgtcagcgatcataatagctatgaaggtgaa
agcgacttcgaaagccgcaacgctccagcagaaagcatacaagaccatctgatctggcaa
ttaaatctaactcatatatctgacagagacattgaaattgcttacgctattatcgagtgc
gttcaaaccgatggctatctaagtatttcaactcaagacatttgggaatcactttgtgtc
gaattagaagatttagacatggaagaagtcatcgcagttcaacacagactgcaacgcttt
gacccagttggcgtctgctctattgatttgcgagactgcttgcttgttcaactagaagca
ttccaaagccaccctctttataaaagcacacacaatctcattgaccattatctaccacta
ctaggcaatcgagattttgcacaattaagccgaaaaacaaaactaaaagacgaagcacta
aaggaagttgttaatttaatacaacaacttaacccgcgtcctggctcagttatagatgca
gatgatacggattatgtcattcctgatgtttccgtcaaaaaacacaatggcatatggcaa
gttgagctaaataatgacgccctaccacccatcaaaataaacgaaacctattccgccatg
gcaagtacagctgcaaccaccgcagcagacgtaagctacattaaaacctctcttcaggaa
gccaaatggtttatgaaaagcttacaaagccgcaacgaaacactcttaaaagtggccagc
tgcatagtaagtcgacaaattgatttcttcgaattaggtgaagaggccatgaaacctatg
gttcttcatgatgtcgccgaagaagttggcatgcatgaatcaacaatttctagagtaaca
acacaaaaatacatgcacacaccaaaaggtatttttgaactcaagtactttttctcaagt
catgtcaacacagcgtcaggtggagaatgttcttctaccgcaatacgagctatgattaag
aaacttgtggctgatgagccagcaaaaaaaccactaagtgataataagttagccgctgtt
ttggctgaccaaggcatacaggttgctagacgaactgtggccaaatatcgagaggcgatg
aatatccctccttccaatgaacgaaaacgactgatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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