KEGG   Metallosphaera prunae: DFR88_07175
Entry
DFR88_07175       CDS       T05966                                 
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
mpru  Metallosphaera prunae
Pathway
mpru03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mpru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DFR88_07175 (tfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpru03021]
    DFR88_07175 (tfb)
Transcription machinery [BR:mpru03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     DFR88_07175 (tfb)
 Prokaryotic type
  Archaeal type
    TFB
     DFR88_07175 (tfb)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Sigma70_r4 HTH_AsnC-type Cyclin_C HTH_24 HTH_Tnp_ISL3 HTH_Crp_2 Sigma70_r4_2 HTH_36 HTH_11 HTH_23
Other DBs
NCBI-ProteinID: QCO31274
UniProt: A0A4D8RZQ3
Position
complement(1343790..1344707)
AA seq 305 aa
MSKENSSDTQCPPDKIIFDADRGEYICSETGEVIEERIVDQGPEWRAFTPEEKEKRSRVG
GPLNQTIHDRGLSTLIDWKDKDAIGRNLDPKRRLEVLRWRKWQIRARIQSSIDRNLAQAM
NELERIGNLLGLPKSVKDEGALIYRKAVEKGLVRGRSIESVVAAAIYASCRRMKIARTLD
EIAQYTKANRKEVARCYRLLLRELNVDVPVSDPKDYVTRIGSLLGLSGASMKLAAEILEK
AKNVGLTAGKDPAGLAAAAIYIAALLNEERRTQKEIAQVAGVTEVTVRNRYKELIQELKI
EIQNQ
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtaaggaaaattcatctgatactcaatgcccccctgataaaataattttcgacgct
gacaggggggagtacatatgctctgaaactggtgaagttatagaggaaaggatagtagac
caaggtccagagtggagagccttcactccggaggaaaaggagaaaaggagcagggttggt
ggacccctcaatcagaccatacatgatcgcgggttgtccacactgattgactggaaggat
aaggatgccataggaagaaaccttgacccaaagaggagattggaagtactgagatggaga
aagtggcagattagggccaggattcagagttccatagataggaacctcgcccaagccatg
aatgagctggaaaggattggcaacctgctaggtcttccaaaatccgtaaaggatgagggc
gctctcatttacaggaaggcagttgagaagggtctagtcagaggaagatcaatagagagc
gtcgtagctgcggcaatctacgcttcctgtagacgtatgaaaattgctagaactttggat
gaaatagcgcaatacacaaaggcaaacagaaaggaagtggccaggtgttataggcttcta
ttgagggaacttaacgttgatgttccagttagtgatccaaaggactacgttaccagaata
ggatccttacttgggctcagcggagcatccatgaagcttgccgcagagatattggagaag
gccaagaatgttgggttaacagctggaaaagatccagcaggactggctgcagctgcaatt
tacattgctgcactcctcaacgaggagagaagaacccagaaagagatagctcaggtcgct
ggagtaaccgaagtgactgtcagaaacagatacaaagaacttatccaagagctaaagatt
gaaatacaaaatcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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