KEGG   Methylovulum psychrotolerans: CEK71_11030
Entry
CEK71_11030       CDS       T04929                                 
Name
(GenBank) ribonuclease E/G
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
mpsy  Methylovulum psychrotolerans
Pathway
mpsy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CEK71_11030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpsy03019]
    CEK71_11030
   03009 Ribosome biogenesis [BR:mpsy03009]
    CEK71_11030
Enzymes [BR:mpsy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     CEK71_11030
Messenger RNA biogenesis [BR:mpsy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CEK71_11030
Ribosome biogenesis [BR:mpsy03009]
 Prokaryotic type
  rRNA processing factors
   CEK71_11030
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 PCB_OB CIS_TMP Rrn6_K-rich
Other DBs
NCBI-ProteinID: ASF46561
UniProt: A0A1Z4BZ76
Position
complement(2422618..2425527)
AA seq 969 aa
MKRMLINATQAEELRVALVDGQKLYDFDIEVPSKEQKKSNIYKGIITRVEPSLEAAFVNY
GADKHGFLPFKEISPAYRHTPEGAEEGRRAAVKDLIKEGQEIVVQIEKEERGNKGAALTT
YISLAGTYLVLMPNNPKAGGISRRIEGDTRSELREVMASLTIPDNMGLIVRTAGCGKNAE
ELQWDLNYLMQLWESIERSSSEQKAPFLVFQESNVIIRALRDHLRGDVDEILIDNQESFA
LVQKFLKQVMPHFLPKAKLYQDAVPLFNRYQIEAQIEVAYNREVSLPSGGSIVIDHTEAL
TSIDINSARATKGNDIEETALNTNLEAAEEIARQLRLRDLGGLFVIDFIDMMSNKNQRSV
ENHLRDALKIDRARIQTGKISRFGLLEMSRQRMRPSLGDSTQIICPRCKGQGTIRNVESV
ALSVLRLIEEEAMKKSTEKVIVHLPIESATFLLNEKRSAIEQIEHRLKVGIVILPSRHME
TPAYEIERIKEKEAAPDDKPSYIQIKAEEITIPEFAQQMKSKVERPVIQEFVHDVPEPIV
QKNEAASLIKRFWHKLVGAVANEPDNKDAAPAIADLEEALPTTGEAVPSRSRNSNRKRNR
NRNRDRDRETATVAAPAMDADKPEKADKQDKPESATQPQRQFRGPGRNVRPNIILPAPAA
ATAQVDAPDKPASAAPAHKELAEAKGSDTLVASAIESDDHISELSAEEQASLRSSSRRSS
RRGPNRRRPRNPNYKRPEDNHEGHSDEEPQLAAQDDFEVAAQVHGEHFSHFDAKPEVSMP
VAVAQAETEVKPVEPAPVIVAEAETAVVTVTDVTPVASVADTGQAAEPEPAAVVIETISE
LAAPVEAATPEPIEVAATAPTPTPEPVEATPMAEIVATPESVISEPVAAEAALAVAPAPE
PESTASEPAGVDVPVAAVSDVVQEVPVQDVPVAVSAEPPLSEIAAPALVAVIAPTEPEAV
TEKPADIPS
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgaaaagaatgcttatcaacgccacgcaggcggaagaactgcgggtcgctttggtagac
ggtcaaaaactgtatgattttgacatagaagtaccatcaaaagaacaaaaaaaatccaat
atttataaaggcatcatcacccgcgtagaacctagcttagaagccgccttcgtcaattac
ggcgccgacaagcacggcttcttgccttttaaggaaatctcccccgcttatcggcacacg
cctgaaggcgccgaagaaggccgtcgtgcggcggttaaagacctgattaaagaaggccaa
gaaattgtcgttcagattgaaaaggaagagcggggcaacaaaggcgcggcgctgaccacc
tatatcagcctcgcaggcacttatctggtgctgatgcccaacaacccgaaagcgggcggc
atttcccgccgcattgagggcgacacccgcagcgaattgcgcgaagtcatggcctccttg
accatccccgataatatggggttgattgtccgcaccgccgggtgcggcaaaaatgccgaa
gaactgcaatgggacttaaattacctgatgcagttgtgggagtccattgagcgctcgtcc
agcgaacaaaaagccccgtttttggtgttccaagaaagcaacgtcatcatccgcgccctg
cgtgaccatttacgcggtgatgtcgatgaaattctgatcgacaatcaagaatcctttgct
ttggtgcaaaaattcctcaagcaagtcatgccgcatttcttgcctaaagcgaaattgtac
caagatgccgtaccgctgtttaaccgttaccaaatcgaagcccaaatcgaagtcgcctat
aaccgcgaagtgtcgttgccgtccggcggctccatcgttatcgaccataccgaagcgctg
acttccatcgatattaactcggcccgcgccaccaaaggcaatgatattgaagaaaccgcg
ctgaacactaatttggaagcggcggaagagattgcccggcaattgcgtctgcgtgactta
ggtggtctgttcgtcatcgatttcatcgatatgatgtccaacaaaaaccagcgcagcgtt
gaaaaccatctgcgtgacgcgctcaaaatcgaccgggcccgtatccaaaccggcaaaatt
tcccgtttcggtttgctggaaatgtccaggcaacggatgcggccttcgttaggcgattcc
acgcaaatcatctgcccccgttgcaaaggccaaggcactatccgtaacgtcgaatccgtg
gcgttgtcggtgttgcggttgattgaagaggaggcgatgaaaaaaagcaccgaaaaagtc
attgtccacttgccgattgaatccgccactttcctgctcaatgaaaaacgcagtgccatt
gagcaaattgaacaccgcctgaaagtcggcatcgttatcttgcctagccgccacatggaa
acgcctgcctacgagattgagcgtattaaggaaaaagaagcggcacctgacgataagcct
agctatatccaaattaaggccgaagagatcactatccctgaatttgcccagcaaatgaag
agcaaagtggagcgtccggtcatccaagaatttgttcatgacgtgcctgaacccattgtc
cagaaaaacgaagcggccagcctgattaaacgcttctggcataagctggtcggtgccgtg
gcgaatgagccggataacaaagatgccgcacctgccattgccgaccttgaagaggccttg
ccgactaccggcgaagccgtgcctagccgtagccgcaactccaaccgtaaacgcaaccgt
aacagaaaccgtgaccgtgaccgtgaaacggcaactgtagcggctccggctatggatgcg
gacaagccagaaaaagctgataaacaggacaaaccggaatcagcaactcagccgcaacgc
caatttagggggcctggccgtaatgtcagaccgaacattatccttcccgcaccagcggcg
gcaaccgcccaagtggatgcaccggataaaccggcatccgccgcaccagcccataaagag
ctggcagaggctaaaggttcggatacattagtcgcatccgctattgaatccgacgaccat
atctcagaattatccgccgaagagcaggccagcctacggtcgtcttccagacgttcgagc
cgccgtggccctaaccgcagaagaccgcgtaaccctaattacaagcgccccgaagacaac
catgaggggcacagtgatgaagagccgcaattggcggcgcaagacgactttgaagtggcg
gcacaggtacacggcgaacatttcagccactttgacgctaagccagaagtatccatgcct
gttgccgttgcacaagcagaaacagaggttaagccggtagagcctgcacctgttatcgtc
gcggaagcggagacggcggttgtaacggttaccgacgtaacgcccgtcgcatcagtagcc
gatactggccaagcggcggaaccggaaccggcggctgttgtcatcgaaacgattagcgaa
ttggcagcgcctgttgaagcggccacacctgagccgattgaagtggccgctaccgcgcct
acgccaacacctgagcctgttgaagctacaccaatggctgagattgttgcaacgcccgaa
agtgtcatatctgaacctgtcgcggccgaagcggcgttagctgttgcgcctgcaccagag
cctgaaagcaccgcatctgaacctgccggggttgatgtgcctgtagcggcggtttccgac
gttgtgcaggaagtgccagtccaagatgtgccagtggcagtcagtgccgaaccgccgctg
agcgaaatagccgcgccagcattagtggcagtcatagcgcctaccgaaccggaagccgtg
acagaaaagccagccgatataccaagctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (41)   

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