KEGG   Methylibium petroleiphilum: Mpe_A2001
Entry
Mpe_A2001         CDS       T00470                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
mpt  Methylibium petroleiphilum
Brite
KEGG Orthology (KO) [BR:mpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mpt03009]
    Mpe_A2001
Enzymes [BR:mpt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     Mpe_A2001
Ribosome biogenesis [BR:mpt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Mpe_A2001
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABM94959
UniProt: A2SHC0
Position
complement(2142989..2145049)
AA seq 686 aa
MNSNDTPPSDTQPDATPHTGDDSAAAAPVKRRTRKAATPAAASTAAVEVTAAVEADADTA
APKTPRRRKPKADVAVAESSDAVASPVAADAPAAAESRPAPIERPVPVSAPAAAEAAEGT
AADSEPTEVAGSGESGAAAGDESVERSRRGRNRRRGRKDRAGREGGEAAGADGSAEPGAE
RPPQAPRPALDPALVVERFEEVLSGAYDAEPPEPDDEASVEQSTKRVLRPEPEAPKLHKV
LAQSGIGSRRDMEQFILDGKVTVNDEVAHVGMRISYGDRIAVDGKPVRLRIQPGPARLLA
YHKPTGEVVTLNDPEGRPTVFRRLPRLQQGKWQSVGRLDINTEGLLLFTNSGELANQLMH
PRFGVEREYAVRVLGSLNEEQRAKLLEGVEIDGQTAGFKSIEEGGGEGANRWYRVVITEG
RNREVRKLFDKVGLAVSRLIRIRYGTVVLPRGLKRGVWVELDDQDLRAIRQLASGNRGAA
AQSESRDAQGNREQRRNNGRNGKPERNARGPQQGGARAQGQGGGERGPRREPRESRFGEA
APDTDGAGEEDFGRIPNPLEQTFDRRFAKGPRRGAAQGFGHGGSQSDHDAGGPPGTIPNP
LEQTFDKRFVKGSQRINAGFGRHDAHQPEPGARKGGPKQPDPMQTSVGYIGADAYFNKAG
GKRGGGGGRGGQGGRGGGGGGRGPRR
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgaattcgaacgacactccgcccagcgatacgcagcccgatgccacgccgcacaccggc
gacgacagcgccgctgcagcgccggtcaagcgacgcacgcgcaaggcggcgacgccagcg
gccgcgagcacggcagccgtggaggtgacggcggccgtcgaagccgatgcggacacagcg
gcaccgaagaccccgcggcggcgcaagcccaaggccgatgtggctgtcgcggagtcgtcc
gatgccgtcgcgtcgcccgtggcggctgatgcgccggcggcggccgagtcccgaccggct
ccgatcgagcgacctgtaccggtctcggcgccggctgccgcggaagcggccgaaggaaca
gccgccgacagcgaaccgaccgaagtggccggatccggcgaatcgggggctgcggccggc
gacgaatcggtcgagcgcagccgtcgtggccgcaaccggcgccgaggccgcaaggaccgc
gccggccgtgaaggcggcgaggctgcgggcgccgatggctcggccgagcccggcgccgaa
cgcccgccgcaggcaccgcgaccggcgctcgatccggcgctggtggtggagcgcttcgag
gaagtgctgtcgggtgcctacgacgccgagccacccgagccggacgatgaggccagcgtc
gagcagtcgaccaagcgcgtgctgcgccccgagcccgaggcgcccaagctgcacaaggtg
ctggcgcagtcgggcatcggttcgcgccgcgacatggaacagttcattctcgacggcaag
gtcacggtcaacgacgaggtggcccatgtgggcatgcgcatctcctacggcgaccgcatc
gccgtcgacggcaagccggtgcgtctgcgcatccagccgggcccggcgcggctgctggcc
tatcacaagccgaccggcgaagtggtcacgctgaacgacccggaagggcgtcccacggtg
tttcgccgtctgccgcgccttcagcagggcaagtggcagtccgtcggtcgcctggatatc
aacaccgagggcctgctgctgttcaccaactcgggtgaactggcgaaccagctgatgcat
ccccgcttcggcgtcgagcgcgagtacgcggtgcgcgtgctcggcagcctgaacgaggag
cagcgcgcgaagctgctcgagggcgtggagatcgacggtcagaccgccggcttcaagagc
atcgaggagggcggtggcgaaggcgcgaaccgctggtaccgcgtggtcatcaccgaaggg
cgcaaccgtgaggtgcgcaagctgttcgacaaggtcggcctggccgtgagccgtctgatc
cgcattcgctacggcactgtggtgctgccgcgcggcctcaagcgcggcgtctgggtcgag
ctcgacgaccaggacctgcgcgcgatccgccagctggccagcggcaaccgtggcgcagcg
gcgcaaagcgagtcgcgcgacgctcagggcaaccgcgaacaacggcgcaacaacggtcgc
aacggcaagcccgagcgcaacgcgcgcgggccgcagcagggcggggcccgcgcgcagggc
cagggcggcggcgagcgcggcccgcgccgcgagccgcgtgaatcgcggttcggcgaggcc
gcacccgacaccgacggcgctggagaggaagacttcggccgcatccccaatccgctggag
cagaccttcgaccgtcgctttgcgaagggcccgcgccgcggcgcagcccagggcttcggg
catggtggctcgcagtcggatcacgacgccggcggcccgcccggaaccattccgaatccg
ctggaacagaccttcgacaagcgcttcgtcaagggctctcagcgcatcaatgccggcttc
ggccggcacgatgcgcaccagcccgagccgggcgccaggaagggcgggccgaagcagccc
gatccgatgcagacctcggtgggctacatcggcgccgatgcctacttcaacaaggccggc
ggcaagcggggcggtgggggtgggcgcggaggccaggggggtcgtgggggcggcggtggg
ggccgcggaccgcgccgctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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