KEGG   Marichromatium purpuratum: MARPU_07345
Entry
MARPU_07345       CDS       T03650                                 
Symbol
sbcB
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
mpur  Marichromatium purpuratum
Pathway
mpur03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    MARPU_07345 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpur03400]
    MARPU_07345 (sbcB)
Enzymes [BR:mpur01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     MARPU_07345 (sbcB)
DNA repair and recombination proteins [BR:mpur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     MARPU_07345 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MARPU_07345 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MARPU_07345 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AHF03698
UniProt: W0E2I1
Position
1593242..1594675
AA seq 477 aa
MSRTFLWHDYETWGADPRRDRACQFAAVRTNAELEEIGDPLVLYCRPATDLLPHPDACLI
TGITPQLAAREGVCEAEFAAAIHAELATPGTCGVGYNSLRFDDEVTRHLLYRNLFDPYAR
EWRNGNSRWDLIDTLRLAHALRPEGIAWPRHEDGSTSFRLEALSAANGIEHGQAHDALAD
VRATIALARLLKRAQPRLFDYALTLRDKRQARALIDRGQPLLHASARYPAALGCIAPIAA
LAPHPGNPNGVLCFDLRHHPALLLDTPVDELRARLFTPAAARGADVQRPPLKTVHLNRAP
VLAPLKTLGAEAAARWQIDPAAVEQHARFAAEHAAELAKRARALFDTPPAAETDPDLMLY
GGGFLGDRDRRLLDELRRLPPAQLVGLAPAFEDPRLPEMLFRYRARNWPETLSPEERERW
DGYRLARLTEPDGGASLTIDDFEQRLAELDAEGLDPARARVLEALADWAEQVLDIAP
NT seq 1434 nt   +upstreamnt  +downstreamnt
ttgtcccggaccttcctctggcacgattacgagacctggggcgccgacccccggcgtgat
cgtgcctgtcagttcgccgctgtgcgcaccaatgccgagctcgaagagatcggcgatccg
ctggtgctctactgccgcccggccaccgacctgctgccccatcccgacgcctgcctgatc
accggcatcacgccgcagctggccgcgcgcgagggggtgtgcgaggccgagttcgccgcc
gccatccatgccgaactggccacccccggtacctgcggggtcggttacaacagcctgcgc
ttcgatgacgaggtcacccgtcatctgctctatcgcaacctgttcgatccctacgcccgc
gagtggcgcaacggcaactcgcgctgggacctgatcgacaccctgcgtctggcccacgcg
ctgcgccccgagggcatcgcctggccgcgacacgaggacggctccacctcgttccggctc
gaggcgctgagcgcggccaacggcatcgagcacggtcaggcgcacgacgcgctggccgac
gtgcgcgccaccatcgccctggcgcggctgctcaagcgtgcccagccgcggctgttcgac
tacgccctgacgctgcgcgacaagcgccaggcgcgcgcgctgatcgatcgcggacagccg
ctgctccacgcctcggcgcgctacccggccgcactcggctgcatcgccccgatcgccgcg
ctcgccccccatccgggcaaccctaacggggtgctctgtttcgacctgcgccaccacccg
gcgctgctgctcgacaccccggtcgatgagctgcgcgcgcgtctgttcaccccggccgcg
gcgcgcggcgccgatgtgcagcgcccgccgctcaagaccgtgcacctcaaccgcgccccg
gtgctcgccccgctcaagaccctgggggcggaggccgcggcgcgctggcagatcgacccc
gctgcggtcgaacagcacgcccgcttcgccgccgagcacgccgccgagctggccaagcgg
gcgcgggcgctgttcgacaccccgcccgcggccgagaccgaccccgacctgatgctctac
ggcggcggcttccttggcgatcgcgaccgccgcctgctcgacgagctgcggcgcttgccg
ccggcgcagctcgtcgggctcgccccggcgttcgaggacccgcgcctgccggagatgctg
tttcgctaccgcgcgcgcaactggcccgagaccctctcaccggaggagcgcgagcgctgg
gacggctatcgtctggcgcgtctgaccgagcccgatgggggcgcgagcctcaccatcgac
gacttcgagcagcggcttgccgaactcgacgccgagggcctcgaccccgcccgcgcccgc
gtgctcgaagcgctcgccgactgggccgagcaggtcctcgacatcgccccctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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