KEGG   Methylobacterium radiotolerans: Mrad2831_2420
Entry
Mrad2831_2420     CDS       T00674                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mrd  Methylobacterium radiotolerans
Pathway
mrd02020  Two-component system
mrd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mrd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Mrad2831_2420
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Mrad2831_2420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mrd03021]
    Mrad2831_2420
Transcription machinery [BR:mrd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Mrad2831_2420
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_3
Other DBs
NCBI-ProteinID: ACB24415
UniProt: B1LYZ4
Position
complement(2583554..2585128)
AA seq 524 aa
MSLVQRLEVRQGQALVMTPQLLQAIKLLQLSHLDLSAYVEAELERNPLLERAEPDLPAAG
DAAESGGHADEAGSDGFEAAEPESWLSADLNPSRGEIESDFDTRLDNVFPDESPVQAREA
GGGDMLSLTPPPYGSTGGSFDAEAPDFEATLTAETSLREHLAGQLDLATRDPAERLIGGF
LIDAVDEAGYLRETVEGVAERLGADPALVGRMLALVQTFDPPGIAARDLAECLAIQLRER
DRFDPAMQALVSRLDLVAKRDFAALRRLCGVDDEDLVDMLGEIRRLDPKPGRAFGSSAVE
VLVPDVFVRAAPDGSWLVELNSEALPRVLVNQSYYARVSRNAAAEGDKAFLSEALQNANW
LTRSLEQRARTILKVATEIVRQQDGFFVHGVTHLRPLNLKTVAEAIGMHESTVSRVTSNK
AIGTSRGTLEMKYFFTAAIPGAAGAAAHSSEAVRHRIKQLVDGETPDDVLSDDALVQKLR
GEGVDIARRTVAKYRESLRIPSSIERRRERFAHGSSQHVALALR
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgagtttggtgcaacggctggaagtgcgtcagggccaggccctggtgatgacgccgcag
ctcctgcaggcgatcaagcttctgcaattgtcgcacctcgatctctcggcctacgtcgag
gccgagctggagcgcaacccgctgctggagcgcgccgagccggacctgccggccgcgggc
gatgccgccgaatcgggcggccacgccgacgaggcggggtcggacgggttcgaggcggct
gagcccgaatcgtggctctcggccgacctcaacccgagccgcggcgagatcgagagcgac
ttcgacacgcgcctcgacaacgtcttccccgacgagagccccgtccaggcgcgcgaggcg
ggcgggggcgacatgctctcgctgacgccgccgccctacggcagcaccggcggcagcttc
gacgccgaggcccccgacttcgaggcgaccctgacggccgagacctcgctgcgcgagcac
ctcgcgggccagctcgacctcgcgacccgggatccggccgagcggctgatcggcgggttc
ctgatcgacgccgtcgacgaggccggctacctgcgcgagacggtggagggcgtggccgag
cgcctcggcgccgacccggccctcgtcggccggatgctggcgctggtccagaccttcgac
ccgcccgggatcgcggcccgcgacctcgccgagtgcctcgcgatccagctgcgcgagcgc
gaccggttcgacccggcgatgcaggcgctggtctcgcggctggacctcgtggccaagcgg
gacttcgccgcgctgcgccgcctctgcggcgtcgacgacgaggacctcgtcgacatgctg
ggcgagatccggcgcctggacccgaagccgggccgggccttcgggtcgagcgccgtcgag
gtcctggttccggacgtgttcgtgcgcgccgcgccggacggctcctggctggtcgagctg
aacagcgaggcgctgccccgggtcctggtgaaccagagctactacgcccgcgtctcgcgc
aacgccgccgcggagggcgacaaggcgttcctgtcggaggcgctgcagaacgccaactgg
ctgacccgctcgctggagcagcgtgcccgcaccatcctgaaggtcgccaccgagatcgtc
cgccagcaggacggtttcttcgtccacggcgtcacccacctgcggccgctgaacctcaag
accgtggccgaggcgatcggcatgcacgaatcgaccgtctcgcgggtcacctccaacaag
gccatcggcacgagccgggggaccctggagatgaagtacttcttcaccgcggcgatcccc
ggggcggccggcgccgccgcccactcctcggaggcggtgcgccaccgcatcaagcagctc
gtcgacggcgagacgccggacgacgtgctgtccgacgacgcgctggtgcagaagctgcgc
ggggagggcgtcgacatcgcccggcgcacggtggcgaagtaccgcgagtccctgcggatc
ccgagctcgatcgagcgccgccgggagcgtttcgcccacggctccagccagcacgtcgcc
ctggcgctgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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