KEGG   Methylobacterium radiotolerans: Mrad2831_3572
Entry
Mrad2831_3572     CDS       T00674                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mrd  Methylobacterium radiotolerans
Pathway
mrd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mrad2831_3572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mrd03019]
    Mrad2831_3572
   03016 Transfer RNA biogenesis [BR:mrd03016]
    Mrad2831_3572
Enzymes [BR:mrd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Mrad2831_3572
Messenger RNA biogenesis [BR:mrd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Mrad2831_3572
Transfer RNA biogenesis [BR:mrd03016]
 Prokaryotic type
  tRNA degradation factors
   Mrad2831_3572
SSDB
Motif
Pfam: RNB CSD2 S1 RNase_II_C_S1
Other DBs
NCBI-ProteinID: ACB25548
UniProt: B1LUW2
Position
3793021..3795342
AA seq 773 aa
MARRTTAPAAEPAAPQPFPTREQILAFVAESKERVGKREIAKAFGIKGAAKIDLKRVLKE
IEEDGALDRGRGGLAPAGHLPPVVLADIRSRDRHGDFLAIPVEWTGTGKPPAIVLVQPRG
PRKGNRPAPGIGDRALIRVERDAEGGYAGRVVKVIGKNKAEIIGVYRAGAQGGRIVPVEK
RAQGREILIPPGEEGQARDGDLVSVSLERETRFGLPKGRVRERLGSLGSEKAVSLIALHL
HNIPHVFADATLAEADAARPATLKGREDWRDRPLLTIDPPDAKDHDDAVMAEADPDPANP
GGFILTVAIADVAAYVRPGSSLDREALERGNSVYFPDRVVPMLPERISNDLCSLREGEDR
PALAVRMVIAADGEKRRHGFHRVMIRSRAKLAYAQAQAAIDGRPDDATGPLLETALRPLW
AAYAALRAARDRRGPLALDLPERKVLLSPEGAVDRVIVPERLDAHRLIEEFMIQANVAAA
ETLEQARQPLIYRVHDEPALEKMRALGEVLASVGIKLPKEGALRPALFNRILATAAETEH
GVFLNEVILRSQAQAVYAPENLGHFGLNLRRYAHFTSPIRRYADLIVHRALITACRLGSD
GLASDVSLGELAQIGEQISAAERRAMAAERETIDRLIAHHLADQVGATFAGQIAGVTRAG
LFIKLDETGADGFVPVSQLGADYFRHEEGRHALVGERTGETFRLGDRVEVRLVEAAPVAG
ALRFELLSEGRTRSGGRTAGPGKKAGGRAFKAAPPGRPPGIRNTGSRHRGSRH
NT seq 2322 nt   +upstreamnt  +downstreamnt
ttggcacgacgcaccaccgccccggcggccgagcccgccgctccgcagcccttccccacc
cgtgagcagatcctcgccttcgtggccgagtcgaaggagcgcgtcggcaagcgggagatc
gccaaggccttcggcatcaagggggccgccaagatcgacctgaagcgcgtcctgaaggag
atcgaagaggacggcgccctcgaccgcggccgcggcggcctcgccccggcgggccaccta
ccgccggtcgtgctggccgacatccgctcccgcgaccgccacggcgacttcctggcgatc
ccggtggagtggaccgggaccggcaagccgcccgccatcgttctggtgcagccgcgcggc
ccccggaagggcaaccgtccggccccgggcatcggcgaccgcgccctgatccgggtcgag
cgcgacgcggaaggcggctacgccggccgggtcgtcaaggtcatcgggaagaacaaggcc
gagatcatcggcgtctaccgggccggcgcgcagggcggccggatcgtgcccgtcgagaag
cgcgcgcagggccgcgagatcctgatcccgcccggcgaggaggggcaggcccgcgacggc
gacctcgtcagcgtctcgctggagcgcgagacgcggttcggcctgccgaaggggcgtgtg
cgcgagcgattgggctcgctcggttccgagaaggcggtgagcctgatcgcgctgcacctc
cacaacatcccgcacgtcttcgccgacgcgaccctggcggaggccgacgccgccaggccc
gccacgctgaagggccgcgaggactggcgcgaccggcccctcctgaccatcgacccgccg
gacgccaaggaccacgacgatgccgtcatggccgaggccgatcccgacccggccaatccc
ggcggcttcatcctcaccgtcgccatcgcggacgtggccgcctatgtccggccgggctcc
agcctcgaccgcgaggccctggaacggggcaactcggtctacttccccgaccgggtcgtg
ccgatgctgcccgagcggatctcgaacgacctctgctccctccgcgagggcgaggaccgg
ccggcgctggcggtgcggatggtcatcgccgccgacggcgagaagcgccgccacggcttc
caccgggtgatgatacgctcccgcgcgaagctcgcctacgcgcaggcgcaggccgccatc
gacgggcgcccggacgatgcgaccgggccgcttctggagacggcccttcgccccctctgg
gcggcctacgcggccctgcgcgcggcccgcgaccgccgggggccgctggccctcgacctg
cccgagcgcaaggtcctgctctcgcccgagggcgcggtcgaccgggtgatcgtgccggag
cgcctcgacgcccaccggctgatcgaggagttcatgatccaggcgaacgtcgccgccgcc
gagacgctggagcaggcccgacagcccctgatctaccgcgtccacgacgagcccgccctg
gagaagatgcgggcgctcggcgaggtcctggcctcggtgggcatcaagctgcccaaggaa
ggggcgctgcgccccgccctgttcaaccggatcctcgccacggcggccgagaccgagcac
ggcgtcttcctcaacgaggtgatcctgcgcagccaggcccaggccgtctacgcccccgag
aatctcgggcatttcggcctgaacctgcgccgctacgcgcacttcacctcgccgatccgg
cgctacgccgacctgatcgtgcaccgggcgctgatcaccgcctgccggctcggatcggac
gggctcgcgagcgacgtctccctcggcgagctggcgcagatcggcgagcagatctcggcg
gccgagcgccgcgccatggcggccgagcgcgagacgatcgaccggctcatcgcccaccac
ctcgccgaccaggtcggcgcgaccttcgcgggtcagatcgccggcgtcacccgggccggc
ctgttcatcaagctcgacgagaccggcgcggacggcttcgtgccggtctcgcagctcggc
gccgactatttccgccacgaggagggccgccacgccctggtgggcgagcgcaccggggag
acgttccgcctcggcgaccgggtcgaagtgcggctcgtggaggccgcaccggtggccggg
gcgttgcgcttcgagctgctcagcgagggccggacccgctccggtggccggactgccggg
cccggcaagaaggccggcggccgggccttcaaggccgcgccgcccggccgcccccccggc
atccgcaacaccgggtcgcgccaccgcggctcgcgccactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system