KEGG   Meiothermus ruber DSM 1279: K649_06470
Entry
K649_06470        CDS       T02636                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mre  Meiothermus ruber DSM 1279
Pathway
mre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K649_06470 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mre03021]
    K649_06470 (rho)
   03019 Messenger RNA biogenesis [BR:mre03019]
    K649_06470 (rho)
Transcription machinery [BR:mre03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     K649_06470 (rho)
Messenger RNA biogenesis [BR:mre03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     K649_06470 (rho)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 Spore_III_AA NACHT AAA_22 AAA_24
Other DBs
NCBI-ProteinID: AGK04594
UniProt: M9XCD3
Position
1327878..1329224
AA seq 448 aa
MPKSSTADPNAEAQVTVTRTGKKIRRKVENKVPLSYQELSSRILPELHLLAAEAGIPNYK
KLSKDELVMLLLSQEASEEGLVIAKGYLEISQDGYGFLQEDLYDMDSRTAIVSAGLIKQY
QLRTGDYVVGKARMARENERYGTLMKVEAVNNLDPEAAAKRPKFDDLIPQFPDRQIILET
TGEESSNRVIDLLAPIGRGQRGLIVAPPKAGKTTLLKKVARAVLRNEPDIKVIVLLIDER
PEEVTDFRESVEGAEVIASTFDEPPQNHIRVAEFVHERSRRIVEEGGHVLILLDSITRLA
RANNLVTPPTGRTLSGGLDSAALHFPKRFLGAARNIRGGGSLTILATALVETGSRMDDVI
FEEFKGTGNMELHLSRRLEERRIFPAIDILKSGTRREELLLGEEVIQKMWLLRKVLADMD
PAEAMEMLLARLSRTKTNKEFLATLGGK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcccaaatccagcactgccgatcccaacgccgaagcccaggtcaccgtgacccgcacc
ggcaagaaaatccgccgcaaggtcgagaacaaggttccgctgagctaccaggagctctcc
agccgcatcctgcctgagctgcacctactggctgcggaagccggcatccccaactacaaa
aagctgtctaaagacgaactggtcatgctcctgctctcgcaggaggccagcgaggagggc
ctggtaatcgccaagggctaccttgaaatcagccaggatggctatggctttttgcaggaa
gacctttatgacatggactcccgcacggccatcgtctcggctggcctgatcaaacagtac
caactgcgcaccggcgattatgtagtgggcaaggcccgcatggcccgcgaaaacgagcgt
tacggcacactgatgaaggtcgaggcggtcaacaacctcgaccctgaggcggccgccaaa
cgccccaagttcgacgacctgataccgcagttccccgaccggcagattatcctcgagacc
accggggaagaatcctccaaccgcgtcatcgacctgttggcgcccattggacgggggcag
cgcggcctgattgtggcgccccctaaagccggtaaaaccaccttgctgaagaaggtggct
cgagccgtgctcagaaacgagcccgacatcaaagtgatcgtgctgctaattgacgagcgc
cccgaagaggtcaccgatttccgcgagtcggtcgagggggccgaggtgatcgcttctact
ttcgatgagccgccgcagaaccacatccgggtggccgagttcgtgcacgagcggagccgc
cggattgtcgaggaaggcggccatgttctgattctgctggactccatcacccgcctggcc
cgggccaacaacctggtcacaccgcccaccgggcgcaccctttcgggcggtctggactcc
gccgccctgcacttccccaagcgcttcttgggggctgcccgcaacattcgcggcggcggc
tcgctcaccatcctggctacggccctggtcgaaaccggcagccgcatggacgatgtaatc
ttcgaagagttcaagggcaccggcaacatggagttgcacctctcgcgccggctggaagag
cgccgcatcttcccggccattgacatccttaagtcgggtacccgccgcgaggagctgctg
ctaggcgaggaggtaatccaaaaaatgtggctcttgcgtaaagtgctggccgatatggat
ccggccgaggccatggaaatgctgcttgcgcgcctgtctcgcaccaagaccaacaaagag
ttccttgcaactttgggtggaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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