KEGG   Minicystis rosea: A7982_05487
Entry
A7982_05487       CDS       T04613                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
mrm  Minicystis rosea
Pathway
mrm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mrm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A7982_05487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mrm03400]
    A7982_05487
DNA repair and recombination proteins [BR:mrm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A7982_05487
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A7982_05487
SSDB
Motif
Pfam: ABC_tran AAA_21 UvrA_inter AAA_16 AAA_29 SMC_N UvrA_DNA-bind nSTAND1 AAA_25 RsgA_GTPase AAA_22 ATPase AAA_23 NACHT nSTAND3 AAA_18 AAA_33 DnaJ_CXXCXGXG cobW NTPase_1 NB-ARC Viral_helicase1 ATPase_2 T2SSE Cytidylate_kin RecA PhoH BCA_ABC_TP_C Anti-TRAP
Other DBs
NCBI-ProteinID: APR80140
Position
complement(6353407..6358692)
AA seq 1761 aa
MHPIRLRGARTHNLKGIDLDFRPGELVAITGVSGAGKSSLALDTLYSEGQRRFVESFSPY
ARQFLERLERPPIDGLDPVAAGVAVDRHAPVKSSRSTVATMADIEPYFCALFAREAVPIC
PDHHVPAVRTDPIVAADRAAAEHEGATALVTYRVPVQGTEAYLTVRESLLAAGYRRLLVR
GETRDIDEVKPTEAISGGAQAGVEVVVDRVKIAARDRKRLGAAIEEAWGRSDGAAALYLT
NGSGQTRLGVARGLTCPTCARAFEAPKMGLFSYQSPTGACPECRGFGRTIGVDWGKVIPD
ESRSIKQGAIRPWSGASTTWERSSLNKFCDRKKIPVDVPWRDLTEAQRTAIIEGEGSWRG
GKFPGVRMWFEWLNTRTYKMHVRVLLARYRSYDVCKACNGKRLAPTSLLYHVDGLDLAAW
HGLELSEARARLDALKTTTGQGEIARRELVARIGYLEKVGLGYLTLDRQARTLSGGEAQR
VSLTSALGTSLTGALFVLDEPTVGLHPSDIPPLVSAMRELAAAGNSVLVIEHEPIVIRAA
DRMIELGPGAGPAGGEIVYDGAPRATASTGDRTARARRKLGEKLTIAGARANNLRDVTVS
FPLGAVVAVTGPSGSGKSTLVEEILYRGLARARGFRDVEAPGPYRAITGASRIVAPVLVD
QAPLGRTSRGNPATYTGAWDRVRALFGKQPEAVAGGLTPAHFSFNVALGRCEACAGEGAE
TIEMQFLADVSLTCPTCRGRRFKDEVLEIKIEGRSVSDVLAMSVDEALQFFEREAAIVRA
LGPLSKLGLGYLALGQPLSTLSGGEAQRIKLAQALGEPSSGQLVILDEPSAGLHPREVAR
LNEALDDLARAGASVVVVDHDVDVIAAADWVIDLGPGAGAHGGRIVAEGTPEDVARTDTR
TGRALADWFEVKRSPAEPRAAKKKPAPAPSAPRAIEVVQAREHNLHEVSTSIPHGKIVVV
TGPSGSGKSTLAFDVVFAEGQRRFLETLTPYARQFLPTLPRPDVDRVTGVPPSIALEQHT
TRSGSSSTVATVTEIAHYLRLLYAKVGEAHCPVCDTMVAAKAPDEVFAEITAMRGNGTLL
SPAVVARKGTYLDVFTAAARAKIERAIVDGKEALTDDPPKLKKTMEHSIDLIVYEGKLAE
IDRALFDRALVFGKGAVKVKPAKGNEILHSTSRACPRCGTGVPELDPRWFSFNTKQGRCE
ACEGAGVEGGPAALLEEERPSPCKACDGSRLSPLPRAVRLAGERYHEVTGRSVADAAAWA
KKLHFSGDRARIAEAPLRELLHRLEFVLEVGLGYLGLDRRAATLSGGEMQRLRLAAQLGS
GLTGALYVLDEPTIGLHPRDTHRLLDNLRKLADMGSTVLMVEHDADTIRAADHLIDLGPS
GGRGGGRIVGEGTPAAVLADPRSPTARALAGELSIASTRVCRGDADVAIELTGARAHNLR
VDSLRIPVGRMTVVAGVSGSGKSTLVRQVLYPAARKALKLVGPEPGPYDKLHLPKGLTRA
IAVDQSPIGRTPRSVPATFLGVWDQVRKLFAASPDAQVRGYGQARFSFNSAAAGGRCPVC
DGNGVIAHEMSFLPDVVTPCEACGGGRFEPATRDVRYLGLSIGEVLDLTAEEAVRAFTSH
PKIRAPLETMCDLGVGYLRLGQGSHTLSGGEAQRLKLASELTAGTRHEPTLYVLDEPTTG
LHLADVARLIAVLDRLVERGDTLVIIEHHPAVIASADHVIELGPEGGAAGGRIVAAGSPR
EIAKKKTATGTVLRELFARGG
NT seq 5286 nt   +upstreamnt  +downstreamnt
atgcacccgatccgcctgcgcggcgcgcgaacgcacaacctcaagggtatcgatctcgac
ttccggcccggcgagctcgtcgccatcaccggcgtctccggcgccggcaagtcgtccctc
gcgctcgacacgctctactccgaggggcagcggcgcttcgtcgagagcttcagcccctat
gcgcggcagttcctcgagcgcttggagcggccgccgatcgatgggctcgatccggtggca
gccggcgtggcggtcgatcgacacgcgccggtgaagagctcgcgatcgacggtggccacg
atggcggacatcgagccttacttctgcgcgctgttcgcgcgggaggcggtgccgatctgc
ccggatcaccatgtgcccgcggtgcgcacggatcccatcgtcgcggccgatcgcgcggct
gcggagcacgagggcgcgacggcgctcgtgacgtatcgcgtgccggtgcaaggcacggag
gcgtatctcacggtgcgggagtcgttgctcgcggccggatatcgcaggctcctcgtgcgc
ggcgagacgcgcgacatcgacgaggtgaagcccaccgaggccatctccggcggcgcgcag
gccggcgtggaggtggtggtcgatcgggtgaagatcgcggcgcgcgatcgcaagcgcctc
ggcgccgcgatcgaggaggcgtggggacgatcggatggagcggcggcgctctacctgacg
aatgggagcgggcaaacgcggctcggcgtggcgcgcgggctcacctgtccgacgtgcgcg
cgggccttcgaagcgccgaagatggggctgttctcgtatcagtcaccgacgggcgcgtgc
cccgagtgccgcggcttcgggcgcaccatcggtgtcgattggggcaaggtgatcccggac
gagtcgcgctccatcaagcagggcgcgatccgcccgtggtcgggcgcgtccacgacgtgg
gagcggagcagcctcaacaagttctgcgatcggaagaagatccccgtggacgtgccctgg
cgcgatctgacggaggcgcagcggaccgcgatcatcgaaggcgaaggctcgtggcgtggg
ggcaagttccccggcgtgcgcatgtggttcgagtggctgaacacgcgtacgtacaagatg
cacgtgcgcgtgctcctcgcgcggtaccgatcgtacgacgtgtgcaaggcttgcaacggc
aagcggctcgcgccgacgtcgctgctctatcacgtggacgggctcgatctcgcggcgtgg
cacgggctcgaattgagcgaggcgcgggcgcggctcgatgcgctgaagacgacgacgggg
cagggggagatcgcgcgccgcgagctggttgcgcggattggctatctggagaaggtcggg
ctcgggtacctcacgctcgatcgacaagcacgcacgctctcgggcggtgaagcgcagcgg
gtgtcgctgacgtcggcgctcgggacgtcgctgacaggcgcgctcttcgtgctcgacgag
cccacggtcgggctccatccgagcgacattccgccgctcgtgtcggcgatgcgcgagctg
gccgcggccggcaattcggtgctcgtgatcgagcacgagcccatcgtgatccgcgcggcc
gatcgcatgatcgagctggggccgggcgcagggcccgcgggcggagagatcgtgtacgac
ggcgcgccgcgcgcgacggcgagcaccggcgaccgaacggcgcgggcgcggcgcaagctg
ggggagaagctgacgatcgcgggggctcgtgccaacaacctgcgcgacgtgacggtgtcg
tttccgctgggcgcggtggtggccgtgacggggccgagcggatcggggaagagcacgctg
gtcgaggagatcttgtatcgcgggctggcgcgcgcgcgtggtttccgcgacgtggaggcg
ccggggccgtatcgggccatcacgggcgcgagccgaatcgtggcgccggtgctcgtcgat
caagcgccgctcgggcgcacgtcgcgcggcaacccggcgacgtacacgggcgcgtgggac
cgcgtgcgcgcgctcttcggcaagcaacccgaagcggtggccggcgggctcacgccggcg
cacttctcgttcaacgtcgcgctcgggcggtgcgaggcgtgcgcgggcgagggcgccgag
acgatcgagatgcagttcctcgccgacgtgtcgctgacctgcccgacgtgccgcgggcgg
cgcttcaaagacgaggtgttggagatcaagatcgagggacgatcggtctccgacgtgctc
gcgatgtcggtggacgaggcgctccaattcttcgagcgcgaggccgcgatcgtgcgggcg
ctcgggcctctctcgaagctcgggctcgggtacctcgcgctggggcagccgctgtcgacg
ctgtcgggcggcgaggcgcagcggatcaagctggcgcaggcgctcggcgagccttcgagc
gggcagctcgtgatcctcgacgagccgagcgcggggctgcacccgcgcgaggtggcgcgg
ctcaacgaggcgctcgacgatctggcgcgcgcgggggcgagcgtggtggtggtcgatcac
gacgtcgacgtgatcgcggcggccgattgggtgatcgatctggggccgggcgccggcgcg
cacggcggccggatcgtggccgaggggacgccggaagacgtggcccggaccgatacacgg
acggggcgcgcgctcgcggattggtttgaggtcaaacgatctccggccgagccccgcgct
gcgaagaagaagcccgcgccggcgccgagcgcgccgcgggccatcgaggtggtgcaggcg
cgggagcacaacctgcacgaggtctcgacctcgatcccgcacgggaagatcgtggtggtg
acgggcccgagcggatcggggaagagcacgctcgcgttcgacgtggtgttcgccgagggg
cagcggcgcttcctcgagacgctgacgccgtatgcccggcagttcctcccgacgctgccg
cgtcccgacgtggatcgcgtgacgggcgtgccgccgtcgatcgcgctcgagcagcacacg
acgcgatcgggatcgagctcgacggtggcgacggtcacggaaatcgcgcactacctccgg
ctgctctacgcgaaggtgggcgaggcgcactgcccggtgtgcgacacgatggtggcggcg
aaggcgccggacgaggtgttcgccgagatcaccgccatgcgcgggaacggcacgctgctt
tcgcccgcggtggtggcgcgcaagggcacgtacctcgacgtcttcacggccgcggcgcgc
gccaagatcgagcgcgcgatcgtggatggaaaagaagcgctcacggacgacccgcccaag
ctcaagaagacgatggagcactccatcgatctgatcgtctacgaggggaagctcgcggag
atcgatcgtgcgctcttcgatcgcgcgctcgtcttcggcaaaggcgcggtgaaggtgaag
ccggcgaaggggaacgagatcctgcactccacgagccgcgcgtgcccgcgctgcggcacc
ggcgttccggagctggatccgcgttggttctcgttcaacaccaagcaagggcgctgcgag
gcctgcgagggcgcaggcgtcgaaggcgggccggcggcgctgctcgaggaggagcggccg
tcgccctgcaaggcctgcgatggatcacggctgtcgccgctgccgcgcgcggtgcggctc
gccggcgagcgctaccacgaggtcacgggacgctcggtggcggacgcggccgcgtgggcg
aagaagctgcatttctcgggcgatcgcgcgcgcatcgcggaggcgccgctgcgcgagctc
ctgcatcgcctcgagttcgtgctcgaggtggggctcggctatctcgggctcgatcggcgc
gcggccactttgtcgggcggtgagatgcagcggctccgcctcgcggcgcagctcggcagc
gggctcacgggcgcgctctacgtgctcgacgagcccaccatcggcctccatccgcgcgac
acgcatcggctgctcgacaacctgcgcaagctcgcggacatggggagcacggtgctcatg
gtggagcacgacgcggacaccatccgcgcggccgatcacctgatcgatctcgggccctcc
ggcggccgcggcggcgggcggatcgtgggcgaagggacgccggcggcggtgctcgcggat
ccgcgctcgccgacggcgcgcgcgctcgcgggcgagctgtcgatcgcatcgacgcgcgtg
tgccgcggcgacgcggacgtggccatcgagctcaccggcgcgcgggcccacaacctgcgc
gtcgactcgctgcgcatccccgtcggccgcatgacggtggtcgcgggcgtgtcgggctcg
gggaagagcacgctggtgcggcaggtgctttatccagcggcgcgcaaggccttgaagctc
gtcggtccggagcccgggccttacgacaagctccacttgccgaaggggctcacgcgcgcg
atcgcggtcgatcaatcacccatcgggcgcacgccgcgatcggtgccggcgacgttcctc
ggcgtgtgggatcaggttcgcaagctgttcgcggcctcgccggatgcgcaggtgcgcggg
tatggacaggcgcggttctcgttcaacagcgcggcggccggcgggcgttgcccggtgtgc
gacggcaacggcgtcatcgcccacgagatgtccttcctgcccgacgtggtgacgccctgc
gaagcctgcggcggcgggcgcttcgagccggccacgcgcgacgtgcgctacctcgggctc
tcgatcggcgaggtcctcgatctcaccgccgaagaggccgtgcgcgccttcacctcccat
ccgaagatccgcgcgccgctcgagacgatgtgcgatctcggcgtgggctatctgcggctc
ggtcagggatcgcacacgctctccggcggcgaggcccagcggctcaagctggccagcgag
ctgacggcggggacgcgccacgagcccacgctttacgtactggacgagcccaccacgggc
ttgcatctcgcggatgtggcgcggctcatcgcggtgctcgatcggctcgtggagcgcggt
gacacgctggtgatcatcgagcatcacccggcggtgatcgcgtcggccgaccacgtgatc
gagctcgggcccgagggcggcgccgccggcgggcgcatcgtcgccgcgggatcgccgcgc
gagatcgccaagaagaagacggcgaccgggacggtcctccgcgagctcttcgcgcgcgga
ggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (54)   

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