KEGG   Methylocystis rosea: EHO51_03475
Entry
EHO51_03475       CDS       T05721                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mros  Methylocystis rosea
Pathway
mros03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mros00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EHO51_03475 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mros03019]
    EHO51_03475 (rnr)
   03016 Transfer RNA biogenesis [BR:mros03016]
    EHO51_03475 (rnr)
Enzymes [BR:mros01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     EHO51_03475 (rnr)
Messenger RNA biogenesis [BR:mros03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EHO51_03475 (rnr)
Transfer RNA biogenesis [BR:mros03016]
 Prokaryotic type
  tRNA degradation factors
   EHO51_03475 (rnr)
SSDB
Motif
Pfam: RNB S1 CSD2
Other DBs
NCBI-ProteinID: AZG78488
UniProt: A0A3G8MCF2
Position
complement(751811..754099)
AA seq 762 aa
MSEPLAKDDTAKHTPSREDILAFITRETEAGGPRKIGVREIARAFGAAGDDRIAIKRLLA
EMADEGILEKRGKRVNRKGTLPPVALVDIIARDRDGEMIAAPVEWDEDELGPAPRIRIHA
PRRARPGEPLPGVGDRALVRAEPDRDAGPNEPPYVGRVVKLLSRQRQRVLGVLHIEANGA
GRIEPIDKKQAGRELAVAAADIGAGKHGDLVSIDLVGKTRFGAPRARVRETLGSVTGEKA
VSLIALRAHDIPDVFRAEATAEAERAQPASLHGREDWRDLPLVTIDPPDAKDHDDAVHAA
PDNAPDNDGGFVLTVAIADVAHYVTPRSALDRDALERGNSVYFPDRVVPMLPERISNDLC
SLRPNEDRPALAVRMRVTSKGRKIDHSFHRVMMRSHAKLAYAQAQDAIEGRTDETTKPLL
APVLRTLYAAHEALQHARNLRAPLDLDLPERKILLKKDGSFDRVIIPPRLEAHRLIEEFM
ILANVAAAETLEQHRQQLIYRAHDEPSREKVSALSEFLATIGVKLAKGQALRPAHFNVIL
GRVKGLEHENIVNEIILRTQAQAEYTHENYGHFGLNLRRYAHFTSPIRRYADLIVHRALI
RALKLGEGALPEMPVGELAEIAARISAAERRAMAAERETVDRLIAHHLADQIGARFAARI
SGVTRSGLFVRLAETGADGFVPAATLGREYYAYDEAAHALTSRSGVSYRLADIIEVKLIE
AAPIAGALRFEVVSGGERRAPPPRASAKPKDRRTSARSKKNR
NT seq 2289 nt   +upstreamnt  +downstreamnt
ttgagcgagcccttggcgaaagacgacacagcaaaacacacgccctcccgcgaagacatc
ctcgccttcatcacccgcgaaaccgaggcgggcggcccgcgcaagatcggcgtgcgtgaa
atcgcccgcgccttcggcgctgccggcgacgaccgcatcgccatcaagcgcctgctcgcc
gagatggcggacgaaggcattctggaaaagcgcggcaagcgcgtgaaccgcaaggggacg
ctgccgccggtggcgctcgtcgacatcatcgcgcgcgaccgcgacggcgagatgatcgcc
gcgccggtcgaatgggacgaggacgagctagggccggcgccgcgcatccgcattcacgcg
ccgcgccgcgcccggccgggcgagcccctgcccggcgtcggcgaccgcgcactcgttcgc
gccgagcccgaccgcgacgccggaccaaacgagccgccctatgtcggacgcgtcgtcaaa
ctcctgtcgcgccagcggcaacgcgtgctcggcgtgctgcatatcgaagcgaatggcgcc
ggccgcatcgagccgatcgacaagaagcaggcgggacgcgaactcgccgtcgcggcggcc
gacattggcgcaggcaagcacggcgatctcgtctcgatcgatctcgtcggcaagacgcgc
tttggcgcgccgcgcgcccgcgtgcgcgaaacgctcggctcggtgacgggcgaaaaggcg
gtgagcctcatcgcgctgcgcgcgcatgacattcccgacgtctttcgcgccgaggcgacg
gcggaggccgagcgcgcgcagcccgcgtctctgcacggccgcgaagactggcgcgatctg
ccgcttgtcaccatcgatccgccggacgccaaggaccacgacgacgcggttcacgcggcg
cccgacaatgcgccggacaatgacggcggcttcgtcctgacggtcgcgatcgccgacgtc
gcgcactatgtgacgccgcgctcggcgctcgaccgcgacgccttggagcgcggcaattcg
gtctatttccctgatcgcgtcgtgccgatgctgcccgagcgcatctccaatgacctgtgc
tcactgcggcccaatgaagatcggcccgcgctcgctgtccgcatgcgcgtcaccagcaag
ggcaggaagatcgaccacagttttcatcgcgtgatgatgcgctcgcacgccaagctcgcc
tatgcgcaggcgcaggacgcaatcgaagggcgcacggatgaaaccacgaagccgctgctc
gctccggtgctgcggacgctttacgccgcgcatgaagcgctgcagcacgcccgcaatctg
cgcgcgccgctcgatctcgatctgcccgagcgcaagatccttttgaagaaagacggctct
ttcgaccgcgtcatcattccgccgcggctcgaagcgcatcggctgatcgaagaattcatg
attctggcgaatgtcgcggcggccgaaaccttggagcagcatcgccagcagctgatctac
cgcgcgcatgacgaaccttcgcgcgaaaaggtctcggcgctttcggagttcctggcgacg
atcggcgtcaagctcgccaagggccaagcgctgcgccccgcgcatttcaatgtgattctg
ggtcgcgtgaagggcctggagcacgagaacatcgtcaacgagatcattctgcgcacgcag
gcgcaggccgaatacacgcatgaaaattacgggcacttcggcctcaatctgcgccgctac
gcgcatttcacctcgccgattcgccgctacgccgatctgatcgtgcatcgcgcgctgata
cgcgccttgaagctcggcgaaggcgccttgccggagatgccggttggcgaactcgcggag
atcgccgcgcgcatctccgcggcagagcggcgcgccatggcggcggagcgcgagacggtc
gatcggctcatcgcgcatcatctcgccgatcagatcggcgcgcgctttgccgcgcgcatc
tccggcgtcacgagatccggtctgttcgtgcgcctcgccgagacaggcgccgatggattc
gtgccggcggcgactctgggccgcgaatattacgcctatgacgaggccgcccatgcgctc
acctcgcgctctggggtcagctaccggctggcggatattatagaagtgaagctgatcgag
gcggcgccgatcgccggcgccttgcgtttcgaggtcgtgagcggcggcgaacgccgcgcg
ccgccgcctcgggcgagcgccaaaccaaaggatcggcggacgtcagcgcgttccaagaag
aaccgatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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