KEGG   Mucilaginibacter rubeus: DEO27_008480
Entry
DEO27_008480      CDS       T06362                                 
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
  KO
K01627  2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
Organism
mrub  Mucilaginibacter rubeus
Pathway
mrub00540  Lipopolysaccharide biosynthesis
mrub01100  Metabolic pathways
mrub01250  Biosynthesis of nucleotide sugars
Module
mrub_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:mrub00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    DEO27_008480 (kdsA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:mrub01005]
    DEO27_008480 (kdsA)
Enzymes [BR:mrub01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.55  3-deoxy-8-phosphooctulonate synthase
     DEO27_008480 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:mrub01005]
 Lipid A
  DEO27_008480 (kdsA)
SSDB
Motif
Pfam: DAHP_synth_1 YlmH_1st
Other DBs
NCBI-ProteinID: QEM10058
UniProt: A0A5C1HZ07
Position
2063416..2064192
AA seq 258 aa
MLFEQISQKPFFILGPCVMENQELLYTVAEKVAEIGQKYNVPVIFKSSFDKANRTSIHSY
RGPGLEKGMEMLMNVKQRFGLPVTTDIHEPFQAAIVAEVADILQIPAFLCRQTDLLVAAA
ETGKIVNVKKAQFLSGHDMFYPAQKLIEAGNNQVILTERGNMYGYNNLAVDFRNIYDMKA
FGHPVCMDCTHSVQRPGGAGGKTGGDRTFVPMMALAAKAFGADGYFMEAHPDPDNALSDG
PNMVKLHDLEKTIIPLIG
NT seq 777 nt   +upstreamnt  +downstreamnt
atgctgtttgaacaaataagccaaaagccgttctttattctgggtccttgtgtaatggaa
aaccaggagttactatatacagttgccgaaaaggttgccgaaatagggcagaagtataat
gtgccggtgatctttaaatcatcatttgataaagccaaccgtacatcaattcactcttat
cgcgggccgggtttagaaaaaggtatggaaatgctgatgaatgttaagcagcgttttggt
ttgccagttacaacagatattcacgagccatttcaggcagctattgttgccgaagttgct
gatatattgcagatcccggcatttttatgccgccagacagatcttttggttgctgctgct
gaaaccggtaaaatagttaacgtaaaaaaggcccagttcctttcagggcatgatatgttt
taccctgctcaaaaacttattgaagcaggcaacaaccaggtaatattaaccgagcgcggt
aacatgtacggttataataacttagctgtcgatttcaggaatatttatgatatgaaggca
ttcggtcatccggtttgtatggattgtacacactcggtacaacgtccgggtggtgcaggt
ggcaaaaccggcggcgaccgtacttttgtaccgatgatggcccttgctgccaaagccttt
ggtgccgacggatatttcatggaagcccatcccgatcctgataatgccctgagtgatggc
ccaaacatggttaagcttcatgaccttgagaaaactataattccgttgattgggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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