KEGG   Mycobacterium sp. JS623: Mycsm_00004
Entry
Mycsm_00004       CDS       T02423                                 
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
msa  Mycobacterium sp. JS623
Pathway
msa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Mycsm_00004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msa03400]
    Mycsm_00004
DNA repair and recombination proteins [BR:msa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Mycsm_00004
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 ABC_tran SbcC_Walker_B DUF2813 AAA_29 AAA AAA_33
Other DBs
NCBI-ProteinID: AGB20472
UniProt: L0IR67
Position
4729..5889
AA seq 386 aa
MFVRRLGLQDFRSWPRADLELEPGRTVLVGPNGFGKTNLVEALWYSSTLGSHRVASDAPL
IRTGAERAVVSTIVVSDGRELAIDLEITAGRANKARLNRSPVRSAREVLGVLRAVLFAPE
DLALVRGDPGERRRYLDELATTRRPRVAAIRADYDKVLRQRAALLKTAGPARHRGDRSVL
DTLDVWDGHLAAHGAQLIAARVELANLLAPEVEKAYQLLAPASRPAAIQYRSGVDVVEAE
AAAGNDNPEIFEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQIAKGFASHGESW
SMALALRLAAYELLRTDGGDPVLLLDDVFAELDNARRQALANVAANAEQVLVTAAVHDDI
PSDWDARRVEITMRDDDSGRISMAVP
NT seq 1161 nt   +upstreamnt  +downstreamnt
gtgttcgttcgccgactgggtttgcaggacttccggtcctggccgcgggccgacctggag
ttggaacccggacggacggtgttagtcgggcccaatggcttcggtaaaacgaatctcgtt
gaggcgctgtggtattcgtcgacgctgggttcgcatcgcgtcgcgtcggatgcgccgctg
atccggacgggcgctgaacgcgccgtggtgtcgacgatcgtggtcagcgacggccgcgaa
ttggcgattgacctggaaatcacggcggggcgcgccaacaaggcgcggctcaaccgctcc
ccggtgcggtcggcgcgcgaggtgctgggtgtattgcgcgcggtgctgttcgcgccagag
gatctggcgttggtgcgcggcgaccccggtgaacggcgccgctacctggacgaactcgcg
accacacgccggccccgggtggctgcgatccgggcggactacgacaaggtgctgcggcag
cgtgctgcgctgctgaagacggcgggaccggcacgccaccgcggtgaccgcagcgtgctc
gacacccttgacgtgtgggacggccaccttgcggcgcacggcgcccaactgattgcggcg
cgcgtggagttggccaacctgctcgcccccgaagtggagaaggcgtaccagctgttggcc
ccggcgtcgcgccccgccgccattcagtaccgcagcggcgtcgacgtggtcgaggcagag
gccgccgcgggcaacgacaacccggagatattcgaggccgcgctactcgacgcgctggcc
cggcgccgcgacgccgaacttgagcgcggcgtctgtctcgtcggtccgcaccgcgacgac
ctcgagctgcggctcggtgatcagatcgcgaaaggcttcgcgagccacggggaatcgtgg
tcaatggcgctggcgctgcgactcgccgcatacgaattgctgcgcaccgatggcggtgat
cccgtcctgctgctcgacgacgtattcgccgaactcgataacgcgcgtcggcaagcgctg
gccaacgtcgcggcgaatgcggagcaggtgctggtgactgcggcggtgcacgacgacatt
ccctccgattgggacgcccggcgggtcgagatcacaatgcgcgacgatgacagcggccga
atttcgatggcggtgccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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