KEGG   Mycobacterium sp. JS623: Mycsm_00885
Entry
Mycsm_00885       CDS       T02423                                 
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
msa  Mycobacterium sp. JS623
Pathway
msa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Mycsm_00885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msa03400]
    Mycsm_00885
Enzymes [BR:msa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Mycsm_00885
DNA repair and recombination proteins [BR:msa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Mycsm_00885
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AGB21315
UniProt: L0IP94
Position
complement(904204..907440)
AA seq 1078 aa
MGLHLHRAERTDLLADSLGHLLSTPLPDPFADELIIVPAKGVERWLSQRLSHILGRGAGH
DGICAGISFRNPHSLIAEITGTIDDDPWSPDAMVWPLLEVIDASCTADWCKTLATHLGHF
EAGEEKELRQGRRYAVARRLAGLFASYARQRPQLLIDWERDADGYIASDLDWQPPLWRAL
LDKVDADPPHVRHAKTLARLQESPLDLPERLSLFGHTRLPSTEVELLTALATHHHLHLWL
PHPSDDLWQKLDTDRGPIPRRDDTSHRNVAHPLLATLGRDLRELQRGLPVDPDTDECLGG
STHPDTLLGWLQSDIAANAVRPAGRTHTPTDRSIQVHSCHGPARQIDVLREVLLGLLSDD
PTLEPRDILVMCPDIETYAPLIVAGFGLGDMIHGVHPAHRLRVRLADRSLVQTNPLLGVA
SQLLSLAGSRATSSEVLNLAAAAPVRARFEFSDDDLEDITRWVREANIRWGFDKEDRQPF
GVDFIQNTWRFGIDRVLAGVAMSDDSHAWLDTTLPLDDVSSNRVELAGRLAEYIDRLHRV
VESLTGTRPLREWLTALEHGIDLLARVNDDDAWQTSQLQREFNEVLRQAGPRAETVMRLP
DIKALLERHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGVVDGDD
VLARNPMTGERDIRSEDRQLLLDAIQATTEHLVITYTGANEYSGHERPPAVPLAELLDAL
DLTTAEPVRDAVVVRHPLQPFDTRNVVPGDLIPDKPFTFDPTVLRAARVRSAGRAEKPPF
ISGPLPAPPTEDVVLADLAAFFRDPVKGFFRALDYTLPWEIDGVEDAMPVDINALEEWTV
GDRMLRDMLDGMQSDQAREAEWRRGTLPPGRLGWRKATEIRDQAALLAEVGRHYRGVASR
AIDVDIDLDGRRLTGTVSPVFSERLVAVTYSKLDGRHLLQSWIPLLALLAHAPRTDWSAI
VIGRPKRGTTPREEVLGRSADSAVELLADLVAIYDAGRREPLPLPIKTSYAWAEAKHTHG
DPERAAMYRWRSDRYPGEDAEKAHERAFGKGAWLSELINRGLDEYASRLWLPMLNALG
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgggcctgcacctccaccgcgctgagcgcaccgatctcctcgccgactccctcggccat
ctgctgtccactcccctacccgaccccttcgccgacgagctgatcatcgtccccgccaaa
ggcgtcgaacggtggctgagccagcggctgtcccacatcctcgggcgcggtgccgggcac
gacggcatctgcgcaggcatctcgttccgcaatccgcactccctgatcgccgagatcacc
ggcaccatcgacgacgacccctggtcgcccgacgcgatggtctggccgctgctcgaggtc
atcgacgccagctgcaccgcggactggtgcaagacgttggccacgcatctcggccacttc
gaagccggcgaggaaaaggagctgcgccagggccggcgctacgccgtcgcccgtcgactc
gccggcctgttcgcctcctacgctcggcagcgcccgcaactgctgatcgactgggaacgt
gatgccgacggttacatcgcatcggatctcgactggcagccgccgctgtggcgcgcgctg
ctcgacaaggtcgacgccgaccccccgcatgttcgccacgcgaaaacccttgcgcgactg
caggaatcaccgctggacctgccggagcggctgtcgctgttcgggcacacccggctgccg
tccaccgaggtcgagctgctcaccgccctggccacccaccaccatctccatctctggctg
ccccacccgagcgacgacctctggcagaagctcgacaccgaccgtggccccatcccccgc
cgcgacgacaccagccaccgcaacgtcgcgcacccgctgctggccaccctcggccgtgat
ttgcgcgagcttcagcgcggtctgcccgtagacccggacaccgacgaatgtctcggtggc
tcaacgcatcccgacactctgctcggctggctgcagtcggacatcgccgccaatgcggtc
agacccgccggccgcacgcacacgccaacagatcgctccatccaagtgcacagctgccac
ggcccggcccgccagatcgacgtgctgcgcgaggtcctgctcggcctgctctccgacgac
cccaccctggagccacgcgacatcctcgtcatgtgcccggacatcgagacctacgcgccg
ctgatcgtcgccggtttcggcctcggcgacatgatccacggcgtgcaccccgcgcaccga
ctgcgggtcaggctggccgaccggtcgctggtccaaaccaacccgctgctcggcgtcgcg
agccaactactcagcctcgcgggcagccgggccacgtccagcgaggtgctcaacctcgcg
gccgcggcgccggtgcgggcgcgcttcgagttcagtgacgacgacctcgaggacatcacc
cgctgggtacgcgaagccaacatccgctggggtttcgacaaggaggacaggcagccgttc
ggcgtcgacttcatccagaacacttggcgattcggcatcgaccgtgtcctcgcgggcgtc
gcgatgtccgacgattcgcacgcctggctcgacaccacgctgccgctcgacgacgtcagt
agtaaccgcgtcgaactggctggccgcctcgcggagtacatcgaccggttgcaccgcgtc
gtcgaatcactcaccggcacacggccattgcgcgagtggctgaccgcgctggagcacggc
atcgatctgctggccagggtcaacgatgacgacgcgtggcagaccagtcagctgcaacgc
gaattcaacgaggtgctgcgccaagccggcccgcgcgccgagacagtcatgcggctgccc
gacatcaaggcgctcctggagcgccatctcgccggtcggcctacccgcgccaacttccgg
accggcacgttgacggtctgcacgatggtgccgatgcggtcggtgccgcaccgggtggtc
tgtttggtcggtctcgatgacggggtgttcccccggctcggtgtggtcgacggcgacgac
gtgctggcgcgcaatccgatgaccggcgagcgcgatatccgttctgaggaccggcaattg
ctgctcgacgctatccaggccaccaccgagcacctcgtgatcacgtataccggcgccaac
gaatactccgggcacgaacgcccgcccgcggtgccgctggccgagctgctcgacgcgctg
gacctgaccacggctgagccagtgcgcgacgcggttgtcgtccgacacccgttgcagccc
ttcgatactcgcaatgtcgttcccggtgacctgatccctgataaaccattcacctttgac
ccgacggtgctgagggccgcacgcgtgcgctccgccggccgcgccgagaagccacccttc
atctccggcccgttgccagcgccgccgaccgaggacgtggtgctcgctgaccttgccgcg
ttcttccgggatccggtaaaggggttcttccgcgcactggactacacgctgccgtgggag
atcgacggggtcgaggacgccatgccagttgacatcaacgcgctcgaggagtggacggtc
ggcgaccgcatgctgcgcgacatgctcgacggcatgcagtccgatcaagctcgggaggcc
gaatggcggcgcggcacactgccgcccggtcggctgggctggcgcaaggccaccgagatc
cgcgaccaggcggcgctgttggcggaagtcgggcggcactaccgcggcgtcgcatcgcgg
gccatcgacgtcgacatcgacctcgacggtcgacggttgaccggcactgtgtcaccggtg
ttcagcgaacgactcgtagcggtgacgtactccaagctcgatggtcgccatctgctgcag
tcatggattccgttgctggcgttgctcgctcacgcgccgcgcaccgactggtcggcgatc
gtcatcggccggcccaaacgcggcacgacgccgcgcgaggaggtgctgggccgttcggcg
gactcggccgtcgaactgctcgccgaccttgtcgccatctacgacgcaggacggcgtgag
ccgctgccgcttccgatcaagacgtcctacgcgtgggcggaggccaaacacacgcacggc
gatcccgagcgagccgcgatgtatcggtggcgctccgatcgctaccccggcgaagacgcc
gagaaggcgcacgagcgggcattcggcaagggcgcctggctgtctgagctcatcaatcgc
ggactcgacgagtacgccagccggctgtggttaccgatgttgaacgcgctcgggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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