KEGG   Mycobacterium sp. JS623: Mycsm_05340
Entry
Mycsm_05340       CDS       T02423                                 
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
msa  Mycobacterium sp. JS623
Brite
KEGG Orthology (KO) [BR:msa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msa03021]
    Mycsm_05340
Transcription machinery [BR:msa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Mycsm_05340
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_38
Other DBs
NCBI-ProteinID: AGB25535
UniProt: L0J1U3
Position
5299054..5299635
AA seq 193 aa
MTLLTPVARLPLVTAELDGLLRGVAHRDVDAFAAFYDRTRARVFGLVTRVLRDPGYSEET
TQDIYLQVWRTADKYDPAAGSPLSWLMTLAHRRAVDRVRSEQAASQRESRYGAANVEPPA
DQVAESVILSDERQQVADCLNSLTDAQRECIRLAYYDGLTYAQVSERLSANLATIKSRMR
DGIRGLRRCLGMT
NT seq 582 nt   +upstreamnt  +downstreamnt
gtgacgttattgacacccgtagctaggctaccgctcgtgaccgccgaactcgacgggctg
ttgcgcggggtggcccaccgggacgtcgatgcgtttgccgcgttctacgaccgcacccga
gccagggtgttcggtctggtcacccgcgtgctgcgcgaccccggctacagcgaagagacc
acgcaggacatctacctgcaggtgtggcggaccgccgacaaatatgatccggccgcgggc
tcaccgctgtcgtggctgatgacgctcgcgcaccgacgtgcggtcgatcgagtgcgctcg
gagcaggcggccagccaacgcgagtcccgctacggtgccgccaacgtcgaaccgcccgca
gatcaggtggccgaatcggtgatcctgagcgacgagcggcagcaggtggccgactgtctg
aactcgctgacggacgctcagcgcgagtgtattcggctcgcctactacgacggtctgacg
tatgcccaagtgtcggaacggttgtcggcaaatcttgcgacgatcaagtcgcggatgcgc
gacgggatccgcggcctgcgcaggtgtctggggatgacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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