KEGG T06041: DSM43276

Mycobacteroides salmoniphilum: DSM43276_02398

Entry

DSM43276_02398    CDS       T06041

Symbol

rluD

Name

(GenBank) Ribosomal large subunit pseudouridine synthase D

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

msal Mycobacteroides salmoniphilum

Brite

KEGG Orthology (KO) [BR:msal00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msal03009]
    DSM43276_02398 (rluD)
Enzymes [BR:msal01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     DSM43276_02398 (rluD)
Ribosome biogenesis [BR:msal03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DSM43276_02398 (rluD)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

QCH24135

Position

complement(2434908..2435825)

AA seq 305 aa
MTSRSLPVPDGLSGMRVDAGLARLLGLSRTAAATLAEEGAVLLDGVVVTKSEKLTAGTWL
EVTLPEPKAPPENRVEAIEGMKILYADDDLVAVDKPAGVAAHASVGWSGPTVLGGLAAAG
FRMTTSGVPERKGIVHRLDVGTSGVMVVALSEKAYTELKRAFKYRRVEKRYHALVQGHPD
PSSGTIDAPIGRHRGHDWKFAVVEDGRHSITHYDTLEAFVAASLLDVHLETGRTHQIRVH
FSAIKHPCCGDLTYGADPTLAAKLGLERQWLHAKSLAFTHPGDGRWMEITSEYPEDLAHA
LDILR

NT seq 918 nt +upstreamnt +downstreamnt
atgacctcgcgttccctgccggtgcccgacggcctctccggtatgcgcgtggacgccggg
ctggcacgcctgctcggtctgtcccgcacggccgccgccactctcgccgaagagggcgcc
gtgcttctggatggggttgtggtcaccaaatccgagaaactcaccgcgggtacctggctg
gaagtcacccttcccgagcccaaggcgccaccggagaatcgggtcgaggccatcgagggc
atgaagatcctgtacgccgatgacgacttggtcgccgtcgacaaaccggcgggtgtcgcg
gcccacgcctccgtcggctggagcggtcccaccgtgctgggcgggctcgccgccgccggg
ttccggatgactacgtccggcgtgccggaacgcaagggaatcgtgcaccgcctggatgtc
ggaacgtccggggtcatggtcgtggcgctgtcggaaaaggcttacaccgagctcaaacgc
gccttcaagtaccggcgcgtggagaagcgttatcacgctctcgtacaaggacacccggac
ccgtccagcggcaccatcgatgcgcccatcgggcggcatcggggccacgactggaaattc
gctgtcgtcgaagacggacgtcactccatcacccactacgacacccttgaggcgttcgtg
gcggccagcctgctggacgtacatctggaaaccggtcgcacccaccagatccgggtgcat
ttctcggccatcaaacacccgtgctgtggcgatctgacctacggcgcggatccgacgctg
gccgccaagcttgggctggaacgtcaatggctgcatgccaaatcgctggccttcacccac
ccgggagacgggcgctggatggaaatcaccagcgagtacccggaggatctggcgcacgca
ctcgacatcttgcgatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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