KEGG   Mycobacteroides saopaulense: MYCSP_01330
Entry
MYCSP_01330       CDS       T05445                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
msao  Mycobacteroides saopaulense
Pathway
msao03030  DNA replication
msao03430  Mismatch repair
msao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MYCSP_01330
   03430 Mismatch repair
    MYCSP_01330
   03440 Homologous recombination
    MYCSP_01330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msao03032]
    MYCSP_01330
   03400 DNA repair and recombination proteins [BR:msao03400]
    MYCSP_01330
Enzymes [BR:msao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MYCSP_01330
DNA replication proteins [BR:msao03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MYCSP_01330
DNA repair and recombination proteins [BR:msao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MYCSP_01330
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 RuvB_N AAA_19 AAA_30 AAA_5 DnaX_C AAA_14 Rad17 AAA_16 Mg_chelatase AAA_18 Herpes_Helicase nSTAND3
Other DBs
NCBI-ProteinID: ALR10328
Position
270962..272950
AA seq 662 aa
MALYRKYRPATFAEVVGQEHVTGPLTTALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CVQGPTSTPCGTCESCVALAPNGSGNVDVIELDAASHGGVDDTRELRDRAFYAPAQSRYR
IFIIDEAHMVTTAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPK
TMRTLVEGICAQENVSVDDPVYPLVIRAGAGSPRDTLSVLDQLLAGADEERVTYQRALSL
LGVTDIALIDDAVDALAAGDGAAVFGAIEGVMDAGHDPRRFGTDLLERFRDLIVLQAVPD
AVERGVVDAPQDVLERMREQAERIGPATLTRYAEVLHAGLGEMRGATAPRLLLEVVCARL
LLPSATDAESAVLQRVERIEKRLDMSVPEAAGVGAAPRFVRKSQAPAVAQAQESAPEPVV
PDLVPAPAPEPPAPPPPQAPAPAPEPAPGPEPEPAPPAPEPTPEPPAPPAPAPEPEPAPE
PEPAPAPEPRQPGALDTTAVRNAWAEIRSKVRDRSRTTEVMLSGATVRAIEGKTLVLSHD
SPPLAKRITESRNAEVIREALKDALGVDWEIRCEAGSAEAAAPAAASRPAKAAPRVVTRP
SRPTPEPAPEPEPEPEPSSPEDDEEQMLAEAGQSEAGPRRDPEEVALELLQNELGARKID
PN
NT seq 1989 nt   +upstreamnt  +downstreamnt
gtggccctgtaccgcaagtatcgcccggcgaccttcgccgaagttgtcggccaggagcat
gtcaccggaccgttgaccactgccctggacgccggccggatcaaccacgcctacctgttc
tcggggccccgtggctgcggtaagacatcttccgcccgcatcctggcccgctcgctgaac
tgtgtgcaggggcccacctcgacaccctgtgggacctgcgaatcatgtgttgcactggct
cccaacggctcggggaacgttgacgtcatcgaactcgacgccgccagccacggtggtgtc
gacgacacccgcgagctgcgtgaccgtgctttctatgcgcccgcccagtcgcgctatcgc
atcttcatcatcgacgaagcgcacatggtcaccactgccggcttcaatgcgctgctcaag
atcgtcgaagagccgcccgaacacctgatcttcgtcttcgcgaccaccgaacccgagaag
gtgttgccgaccatccggtcgcgtactcaccactaccccttccggctgctggcgcccaag
acgatgcgcaccctcgtcgagggcatctgtgcccaggagaatgtctcggtcgacgacccg
gtgtatccgctggttatccgtgccggtgctgggtcacctcgtgacaccctgtcggtgctt
gaccagttgcttgccggtgcggacgaggagcgcgtcacctatcagcgggcgctctcgctg
ctgggtgtcaccgatatcgcgttgatcgacgacgcggtagacgcgcttgccgccggtgat
ggcgcggcggtgttcggagcgatcgaaggtgtgatggatgccgggcacgacccgcggcgc
tttggtaccgacctgctggagcgcttccgcgatctgattgtgctgcaagctgttccagat
gccgtggaacgcggtgtggtcgacgctccgcaggatgtgctcgagcgtatgcgtgaacag
gccgagcgcatcggtccggccacattgactcgctacgccgaggtgttgcatgccgggctg
ggtgagatgcgcggtgccacggcgccgcggctgctgctggaagtggtgtgtgccagactg
ctgctgccctcggctacggatgccgaatcggctgtgctgcaacgtgtcgagcgcatcgag
aagcgattggacatgtcggtccctgaggctgcgggcgtgggtgcggcaccgaggtttgtg
cgcaagtcgcaggcgcccgctgtcgcccaggcgcaggaatctgctcccgagcccgtagtg
ccggatctcgtgccagctccggcaccggagccaccggcccccccaccaccgcaggcaccc
gctcccgctccagaaccagcccctggtcccgagccagaaccagcacccccggctccggag
ccaacgccggagccccccgcgccgcctgcgcctgccccggaaccggaaccggccccagaa
ccggaaccagctccggcgcccgagccgcgtcagcccggcgctctcgacaccacagccgta
cgcaacgcctgggctgagattcgttccaaggtgagagaccgcagtcgcaccaccgaggtc
atgctctccggtgccaccgttcgggcaatcgagggcaaaacccttgtgctgtcccatgat
tcgccgccgttggctaagcgcatcaccgagtcgcgtaacgccgaggtgatccgggaggcg
ctcaaggacgcactcggtgtggactgggagatccgttgtgaggccggcagcgcggaggca
gcggcgcccgcggccgcctctcggccggccaaggccgccccgcgggtggtcacccggccc
agccgcccgacgcccgaaccggcgccagaacccgagccggagccggagccttcgtcaccc
gaggatgacgaagagcagatgctcgccgaggcgggacagagtgaggccggcccgcgacgc
gacccggaagaggttgcgctggaactacttcagaacgagctgggcgcgcgcaagatcgat
cccaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (28)   

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