KEGG   Mycobacteroides saopaulense: MYCSP_15000
Entry
MYCSP_15000       CDS       T05445                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
msao  Mycobacteroides saopaulense
Brite
KEGG Orthology (KO) [BR:msao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msao03032]
    MYCSP_15000
   03036 Chromosome and associated proteins [BR:msao03036]
    MYCSP_15000
   03400 DNA repair and recombination proteins [BR:msao03400]
    MYCSP_15000
DNA replication proteins [BR:msao03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MYCSP_15000
Chromosome and associated proteins [BR:msao03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MYCSP_15000
DNA repair and recombination proteins [BR:msao03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MYCSP_15000
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HC2
Other DBs
NCBI-ProteinID: ALR12494
UniProt: A0A1S1JRU6
Position
complement(3034978..3035607)
AA seq 209 aa
MNKAELIDVLTQKLGSDRRQATAAVEHVVDTIVRTVHKGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPTFRPGAQFKAVVSGSQKLPADGPAVKRGSTAAPAKRAAAKKAA
PAKKAPAKKAAPVKKAVVKKAAPAKKAPVKKAVVKKAAPVKKAVVKKAAPAKKAPVKKAV
TKAPAKKAATKAPAKKAPAKKAPAKKGRK
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaacaaagcagagctcatcgacgttctgacacagaagttgggctcggatcgccggcaa
gccaccgctgcggtggagcacgtcgtcgacaccatcgttcgcaccgtgcacaagggtgag
agcgtgacaatcaccggatttggcgttttcgagcagcgccgtcgcgccgcgcgtgtcgcc
cgcaacccgcgcaccggtgagaccgtcaaggtgaagccgacgtcggttccgacgttccgt
cccggtgcacagttcaaggcggttgtctctggctcgcagaagcttccggccgacggcccc
gctgtgaagcgtggttccaccgccgccccggccaagcgtgccgccgccaagaaggccgcc
ccggccaagaaggctccggccaagaaggctgcgcctgtgaagaaggcagtcgtcaagaag
gctgctcccgccaagaaggccccggtcaagaaggcagtggtcaagaaggctgcgcctgtg
aagaaggcagtcgtcaagaaggctgctcccgccaagaaggccccggtcaagaaggccgtg
accaaggctccggccaagaaggctgcgaccaaggctcccgccaagaaggccccggccaag
aaggctcccgccaagaagggccgcaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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