KEGG   Methylocystis sp. SC2: BN69_0782
Entry
BN69_0782         CDS       T02324                                 
Name
(GenBank) Ribonuclease, Rne/Rng family
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
msc  Methylocystis sp. SC2
Pathway
msc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN69_0782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msc03019]
    BN69_0782
   03009 Ribosome biogenesis [BR:msc03009]
    BN69_0782
Enzymes [BR:msc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     BN69_0782
Messenger RNA biogenesis [BR:msc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BN69_0782
Ribosome biogenesis [BR:msc03009]
 Prokaryotic type
  rRNA processing factors
   BN69_0782
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: CCJ06233
UniProt: J7QM40
Position
complement(847050..850034)
AA seq 994 aa
MANKMLIDASHPEETRVVVLRGNRVQEFDFEAADKKPLRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPVADRQALLDEESRAHQQADEEERVPHGRGRRSRRRQHE
GAEKRVSADEAVTGELLDDSAASPVVIEDQAETGFAESAEERSEAAPAFAPQAGAQEPLD
AWPAAVETQARGQDVGAEQLDAGKPESVEAGPERSDIEAEAGDETLAAGQHERISIDPAG
FGLVETGEAEEFALESTEPDHELKARRQDERDEARERAREDSEDETAEVSARVDAPVEEH
DEEEHDDEDDHVEHIGGDAMDEAPYRAPRARRQYKIQEVIKRRQVLLVQVVKEERGNKGA
ALTTYLSLAGRYSVLMPNTARGGGISRKITDGADRKRLKEIVHDLEVPEGMGVILRTAGA
TRTKQEVKRDFEYLLRLWESVRELTLRSAAPTLVYEEGSLIKRAIRDLYGRDVEEVVVSG
EDAYREAKDFMRMLMPSHAKNVRLHRDAFPIFAESGVEAQLDAMFSNHVTLKSGGYLVIN
QTEALVAIDVNSGRSTREHNIEDTALRTNLEAADEVARQLRLRDLAGLIVVDFIDMEESR
NNRAVERRLKDALKNDRARIQVGRISHFGLLEMSRQRIRAGVVEGSTVPCPHCAGAGHVR
STASVALHVLRVLEEALVKSAAHDVTLRTRAVVALYILNQKRAHLQELERRFGVHITVAA
DDTLTGATYHALERGELATGPRVSQRDAPLRVDSVLAEPLEEEAPEDVIAGEMVEAEEEA
VESNGDQRDENGERSRFGADEEASRGRRRRRRRGRGGGAQGGELLAPGVDQPSDEGLAFM
AAIEGAPAPAEERPDRRGGRRGGNRSPERGPGRWRRSAPLPEEFKDPSAVFALDEGREEA
PALISPRVAQAPEFPAPLPVPPPVNGAEIAPLSQERASEPVARIAPSQAPTPTPAPAPEP
VAPREPTEVVITQADPDRPKKGGWWQRVRTPFGS
NT seq 2985 nt   +upstreamnt  +downstreamnt
atggctaacaagatgctcatcgacgcctcccacccggaggagacccgcgtagtcgttcta
cgtggaaaccgcgttcaggaattcgatttcgaggctgccgacaaaaaaccgctacgcggc
aacatttatctcgcgaaggtcacgcgggtcgagccgtcccttcaggccgctttcgtcgac
tatggcggaaaccgtcacggctttctggcctttgcggaaattcaccctgactactatcag
atccccgtcgccgatcgacaggcgctgctcgacgaagagagccgcgcccatcagcaggcc
gacgaggaagagcgcgttccgcacggtcgcgggcgccggtcgcgccgccgccaacatgag
ggcgccgagaagcgcgtgagcgccgacgaggctgtgacgggcgaactcctcgatgattcg
gccgcttcgccggtcgtcatcgaggatcaggccgaaacaggcttcgccgaatcggccgag
gagcggtctgaagccgcgccggcgttcgcgcctcaggcgggggcgcaggaaccgcttgac
gcttggccagcggccgtcgagacccaagcgcggggccaagacgtcggggcggagcagctt
gacgcgggaaagcccgaatccgtcgaggccgggccagagcgctcggacatcgaggccgag
gcgggcgatgagacgctcgctgcggggcagcatgagcggatttcgatcgatcccgccggt
ttcggcttggtcgagaccggcgaggccgaggagttcgcccttgagtcgaccgagcccgac
cacgaactgaaagcgcgccgacaggacgagcgtgacgaggcgcgtgaacgcgcccgcgaa
gattcggaagacgaaacggctgaggtcagcgcccgcgtcgacgccccggttgaggagcac
gacgaggaagagcatgacgacgaggacgatcacgtcgagcacatcggcggggacgcgatg
gatgaagcgccttatcgcgcgccgcgcgcccgccgccagtacaagattcaagaggtcatc
aagcgccgtcaggtgctgctcgttcaggtcgtcaaggaagagcgcggcaacaagggcgcg
gcgctcacgacctatctttcgctcgctggccgctattcggtgctcatgcccaacaccgcg
cggggcgggggcatttcgcgcaagatcaccgacggcgccgaccgcaaacgcctgaaagag
atcgtgcatgatctcgaagtgccggagggcatgggcgtcatcctgcgaaccgcgggggcg
acgcgcaccaagcaggaggtcaagcgcgatttcgaatatctgctgcggctgtgggagagc
gtgcgcgaattgaccctgcgctccgcggccccgaccctcgtctatgaggaaggctcgctc
atcaagcgggcgattcgcgacctttacgggcgcgacgtcgaggaagtcgtcgtttcgggc
gaagacgcctatcgcgaggccaaagacttcatgcgcatgctgatgccgagccacgcgaag
aacgtgcgcctgcatcgcgacgcgtttccgatcttcgccgaaagcggcgtcgaggctcag
ctcgatgcgatgttctccaaccatgtcacgctgaaatcaggcggctatctggtcatcaac
cagaccgaggcgctggtcgccatcgacgtgaactcgggacgttcgacgcgcgagcacaat
atcgaggacacggcgcttcgcaccaatctcgaagccgccgacgaagtcgcgcggcagttg
cgactgcgcgatctcgccgggctgatcgtcgtcgatttcatcgacatggaggagagtcgc
aacaatcgcgccgtggagcggcgcttgaaggacgcgctgaaaaacgaccgcgcccgcatt
caggttggccgcatctcgcatttcggcttgctcgaaatgtcgcgccagcgcatccgcgcc
ggcgtcgtcgagggctcgacggtgccatgtccgcactgcgccggcgccggccatgtgcgc
tccaccgcctccgtcgcgctgcatgtgttgcgcgtgctggaggaggcgctggtcaagagc
gccgcgcatgacgtgacgctgcgaacccgtgcggtggtggcgctctacattctcaaccag
aagcgcgcccatctgcaggagctcgaacgccgcttcggcgtccatatcacggtcgccgcc
gatgacacgctcaccggcgcgacctatcacgcgctcgagcgcggcgaactcgcgaccggg
ccgcgggtttcgcagcgcgacgcgccgttgcgcgtcgattcggtgctcgccgaacctctg
gaggaagaggcgccggaagacgtgatcgcgggcgaaatggtcgaggcggaagaggaagcc
gtcgagtcgaacggcgatcagcgtgacgagaacggcgaacgatcgcgttttggcgcggat
gaagaggcgtcgcgcgggcgtcgccgtcgccgtcgccgaggccgtggcggcggcgcacag
ggcggcgaactcttggcgcccggcgtcgaccagccgtccgacgaaggcctcgccttcatg
gcggcgatcgagggcgcgccggcgcccgccgaggaacggcctgaccgccgcggcggccga
cgcggcggcaaccgaagtccagagcgcggtcctggccggtggcggcgatccgcccccttg
ccggaggaattcaaagacccgtcggcggtcttcgcgctcgacgagggtcgggaggaggcg
ccggccctgatctccccgcgtgtggcccaggcgccggagtttccggcgcccttgccggtt
ccgccgccggtaaacggcgccgagattgcgccgctctcccaagagcgcgcaagcgagccg
gtcgcccggatcgctccttctcaggcgccgacgccgacgcccgcgcccgcccccgagccg
gtcgccccgcgcgagcccacggaagtggtcatcacgcaggcggaccccgaccgcccgaag
aagggcggctggtggcagcgcgtgcgcacgcctttcggaagttag

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