KEGG   Myxococcus stipitatus: MYSTI_02368
Entry
MYSTI_02368       CDS       T02436                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
msd  Myxococcus stipitatus
Pathway
msd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYSTI_02368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msd03019]
    MYSTI_02368
   03016 Transfer RNA biogenesis [BR:msd03016]
    MYSTI_02368
Enzymes [BR:msd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     MYSTI_02368
Messenger RNA biogenesis [BR:msd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MYSTI_02368
Transfer RNA biogenesis [BR:msd03016]
 Prokaryotic type
  tRNA degradation factors
   MYSTI_02368
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase S1_2 PDCD9 DUF3500
Other DBs
NCBI-ProteinID: AGC43684
UniProt: L7UB45
Position
2965371..2967539
AA seq 722 aa
MLKKSVKIGESELSIEVGRMAKQADGSVVVRYGDTMLLVTAVSAREKKDVDFLPLTVEYQ
EKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSARPLFPEGYAYETQIIASVISADPEN
EGDVHGITGASAALWVSDIPFNGPIAGIRVGRVGGQLVANPTAKQREQSDLDLVMAVSRE
AIVMVEGGAEEVSEADMVAALEFGFKSAQPALDLQDELRRELNKQVRAFDKAPAVDEALR
AKVRDLAMAGIKAGYEIKEKGARYDALSKAKKETIVKLKEQMGETFTSQVEKHAKQVVED
LKYEHMREMTVNGGRIGGRGHDVVRAITCEVGVLPRTHGSALFTRGETQALVVTTLGTSE
DEQRLEMLGGMTFKRFMLHYNFPPFSVNETKPLRGPGRREIGHGALAERALRNMVPKSDS
FPYTVRLVSDILESNGSSSMASVCGGTLALMDAGVPIKSPVAGIAMGLVKEGDKVAILSD
ILGDEDHLGDMDFKVCGTTKGITSIQMDIKITGLTTEIMSRALEQARQGRIHILGEMLKS
LAQPRKEISQYAPRITTIQIRPEFIKNVIGPGGKVIKDIIARTGAAINIEDSGRVDIASA
NGEAVKAAIAMIQALTREAEIGKIYTGTVRKIAEFGAFVELFPGTDGLIHISELSDKRVK
SVSDVLKEGDEVLVKVVSIDKTGKIRLSRKEAMAERAAQQQGAADTVAAQPAPEATQPNA
KA
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgttgaagaagagcgtcaagattggtgagagcgagctgagcatcgaagtgggccgcatg
gccaagcaggccgacggctccgtggtggttcgctatggcgacaccatgctgctggtgacc
gcggtcagcgcgcgcgagaagaaggacgtcgacttcctgccgctgacggtggagtaccag
gagaagctgtactcggccggccgcatccccggcagctacttcaagcgcgagggtcgcctc
acggagaaggagacgctggccagccgcctggtggaccgctccgcgcgtccgctgttcccg
gaaggctacgcgtacgagacgcagatcatcgccagcgtcatctccgcggacccggagaac
gagggcgacgtgcacggcatcaccggcgcctccgcggcgctgtgggtgtcggacatcccg
ttcaacggccccatcgccggcatccgcgtgggacgcgtgggtggtcagctggtggcgaac
cccaccgcgaagcagcgtgagcagagtgacctggacctggtcatggcggtcagccgcgag
gccatcgtcatggtcgagggcggcgccgaagaggtgtccgaggcggacatggtggccgcg
ctggagttcggcttcaagtccgcgcagcccgcgctggacctgcaggacgagctgcgccgc
gagctgaacaagcaggtgcgcgcgttcgacaaggcgcccgcggtggacgaggcgctgcgc
gccaaggtccgcgacctggcgatggcgggcatcaaggccggctatgaaatcaaggagaag
ggcgcccgctacgacgcgctctccaaggcgaagaaggagaccatcgtcaagctcaaggag
cagatgggcgagaccttcacgtcgcaggtggagaagcacgccaagcaggtggtggaggac
ctgaagtacgagcacatgcgcgagatgacggtcaacggtggccgcatcggtgggcgtggg
cacgacgtggtccgcgccatcacgtgtgaagtcggcgtgctgccgcgcacgcacggaagc
gcgctgttcacccgtggcgagacgcaggccctggtcgtcaccacgctgggcaccagcgag
gacgagcagcgcctggagatgctgggtggcatgacgttcaagcgcttcatgctgcactac
aacttccccccgttcagcgtgaacgagaccaagccgctgcgtggcccgggccgccgtgaa
atcggccacggtgcgctggcggagcgcgcgctgcgcaacatggtgccgaagagcgactcg
ttcccgtacacggtgcgcctcgtgtcggacatcctggagtccaacggctcctcctccatg
gcctctgtgtgcggtggcacgctggcgctgatggacgcgggtgtccccatcaagtcgccg
gtggcgggtatcgccatgggtctggtgaaggagggcgacaaggtcgccatcctgtcggac
atcctcggtgacgaggaccacctgggcgacatggacttcaaggtgtgcggcaccacgaag
ggcatcacgtccatccagatggacatcaagatcaccggcctcaccacggagatcatgagc
cgcgcgctggagcaggcgcgtcagggccgcatccacatcctgggcgagatgctcaagtcg
ctggcgcagccccgcaaggagatcagccagtacgctccgcgcatcaccaccatccagatt
cgtcccgagttcatcaagaacgtcatcgggccgggcggcaaggtcatcaaggacatcatc
gcgcgcaccggcgcggcgattaacatcgaggactccggccgggtggacatcgccagcgcg
aacggcgaggccgtgaaggccgccatcgcgatgatccaggcgctgacccgcgaggcggag
atcgggaagatctacacgggcaccgtgcggaagatcgccgagttcggcgccttcgtggag
ctgttcccgggcaccgacggcctcatccacatctccgagctgtccgacaagcgcgtcaag
agcgtctccgacgtgctgaaggagggcgatgaggtgctggtgaaggtggtcagcatcgac
aagacgggcaagattcgtctgtcgcgcaaggaggcgatggcggagcgcgcggcgcagcag
cagggcgcggcggacaccgtcgcggcgcagccggcccccgaggccacccagcccaacgcc
aaggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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