KEGG T02436: MYSTI

Myxococcus stipitatus: MYSTI_02779

Entry

MYSTI_02779       CDS       T02436

Name

(GenBank) UvrABC system protein A

K03701

excinuclease ABC subunit A

Organism

msd Myxococcus stipitatus

Pathway

msd03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:msd00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYSTI_02779
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msd03400]
    MYSTI_02779
DNA repair and recombination proteins [BR:msd03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MYSTI_02779
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MYSTI_02779

SSDB

Motif

Pfam:

ABC_tran UvrA_inter AAA_21 AAA_16 AAA_29 SMC_N nSTAND1 UvrA_DNA-bind RsgA_GTPase nSTAND3 AAA_25 AAA_22 AAA_33 NACHT AAA_15 cobW Viral_helicase1 NTPase_1 DnaJ_CXXCXGXG HypA Vps36-NZF-N

Other DBs

NCBI-ProteinID:

AGC44095

UniProt:

L7U8F4

Position

3527066..3532372

AA seq 1768 aa
MHKTHLVGARTHNLKELSVDLAEGELVCITGVSGAGKSSLALDTLYAEGQRRFVESFSPY
ARQFLERLERPPMEALEPVAAGVAVDRRAPVKSSRSTVATLADVEPYLSALFTREAMPVC
PTCGVEAVRTDARSAATALLRESPDAPALIAFPLRIPDTASFLDARARLLKDGFHRLVVQ
GEVRELESLKPSEATDSAGVARVLVDRVKLSQSQLSRVTQAVEDAWNRAEGEAVVWVAGG
EAKRVRRGLVCPKCAREFEAARPGLFSYQSPVGACAACRGFGRTIGIDWEKVTPNPALSL
SEGAIRPWSGASTEWERGMLQRWCREKGIPMDKPWSSLTNAQRESVLEGAGDYDEGRQYP
GVRAWFRWMESRTYKMHVRVLLARYRAYSLCQSCGGARLNEQARAYRVGGLDLPGWHGLE
LTEAVARLEALRPTTGQGELARRELSARLRYLRRVGLGYLTLDRQARTLSGGEAQRVSLT
AALGTSLTGSLFVLDEPTVGLHPGDVPPLTEAIAELAERGNIALVIEHDPLVIRSAHRVL
ELGPGAGREGGRLCFDGTPEALAKREDLPTGRLLAGTGEAPRTPRKRTGSLEIRGAREHN
LKALSVSVPLGVLCAVTGPSGSGKSTLVDEVIYRHLARRLGVKDVEAPGAVDALEGAEEV
KSITFVDQSPLGRTSRGNAATYTKAWDKLRELFASEPDAEVRGLTPAHFSFNVDKGRCEA
CSGEGYETVEMQFLADVALLCAVCRGRRFKEEVLAVRHQGFSVAQVLEMTVAEVLQHFGK
DTALQRTLGPVARLGLGYLPLGQPLSTLSGGEAQRLKLARALASESKDALFIIDEPSAGL
HAEDVRHVIDALHALVDRGASVLVVDHDVSVMKASDWMVDLGPVGGRDGGRLVAEGTPAD
VARGKGATAEALRGERRAQARPSKARKVAKDAAPAIEVEHAREHNLQDVSCKIPLGKLTV
VTGPSGSGKSSLAFDVVFAEGQRRFLETLSPYARQFLPTMPRPDVERVSSIPPSVALEQR
TSRAGGTSTVATVTEVAHYLRLLFAKLGEPHCPKDDTPITSMSPELLFAQLQAMKGEGTV
LAPAVRARKGTYLDVFTAAARAGITQAIVDGALASTDDPPRLAKTREHDIDLVMFEGKLS
KLPRDLFDKALGWGQGALKIRAGKGETLLSTERTCPRCGTAVPELDPRWFSFNTKQGRCD
SCEGTGIQGGPTAQAEGETAPCKACGGSRLDPVPRGVRLEGARYHEVVRQSVASALARVK
GWKFKGDRALLGEPSRQELLRRMEFLERVGLGYLSLDRNAASLSGGEMQRLRLSAQLGAG
LTGAMYVLDEPTIGLHPRDTHRLLDNLRALVNTGSTVLVVEHDSDTIRAADHLLDLGPTG
GRGGGRILAEGPPDVVLQGDSPTAYALRESQVRPPSGRGAPQKWIELKGARANNLKRVDL
RLPVGRLNVVSGVSGSGKSTLVRHVLYPALREALELVSSKPGPFDSLRGVEAVKRVMSVD
QSPIGRTPRSVPATFLGIWDELRRAFAATPEAKIRGFSAARFSFNTASGGRCTTCEGQGS
ISHEMSFLPDVVTPCEACGGARFDAATLEIRYHGLSIGDVLRLSADEAKDVFKALPKVAA
PLQCLSDLGVGYLQLGQGSNTLSGGEAQRLKLASELTASSRHEPTLYVLDEPTTGLHLGD
VEKLITFMGRLVDRGDTLVVIEHHPSVIGAADHVVELGPEGGEEGGLIVAEGTPREVAKV
KSATGRVLRSLFTNEEPASSRRGSGASR

NT seq 5307 nt +upstreamnt +downstreamnt
atgcacaagacccacctcgtaggcgcccgcacgcacaacctgaaggaactctccgtcgac
ctggccgagggggagctggtctgcatcaccggcgtctcgggggcgggcaagtcgagcctg
gcgctcgacacgctgtacgccgagggacagcggcgcttcgtggagagcttcagcccctat
gcccggcagttcctggagcggctggagcggccgcccatggaggcgctggagcctgtcgcc
gcgggtgtggcggtggaccggcgcgcgccggtgaagagctcgcgctcgacggtggccacg
ctggcggacgtggagccgtacctgtccgcgctcttcacgcgtgaggcgatgcccgtgtgc
cccacgtgcggcgtggaggcggtgcgcaccgatgcgcgctccgcggcgacggcgctcttg
cgcgagtctccggatgcgcccgccctcatcgcgttcccgctgcgcatcccggacacggcg
tcgttcctggatgcccgcgcgcggctcttgaaggacggcttccaccggctggtggtgcag
ggcgaggtgcgggagctggagtcgctcaagccctcggaggcgacggactcggcgggggtg
gcgcgggtgctggtggaccgggtgaagctgtcgcagtcgcagctctcgcgcgtgacgcag
gcggtggaggacgcgtggaaccgcgcggagggcgaggccgtggtgtgggtggccggcggg
gaggcgaagcgcgtgcgccggggcctggtgtgtcccaagtgcgcgcgggagttcgaggcc
gcgcgccccgggttgttcagctaccagtcccccgtgggcgcgtgcgcggcgtgccggggc
tttggccgcaccatcggcatcgactgggagaaggtgacgcccaacccggcgctgagcctg
tcggagggcgccatccgcccctggtccggtgcgtcgacggagtgggagcgaggcatgctc
cagcgctggtgccgcgagaagggcatccccatggacaagccctggtcctcgctgacgaac
gcgcagcgcgagtcggtgctggagggcgcgggggactatgacgagggccgccagtatccc
ggcgtgcgcgcgtggttccggtggatggagagccgcacgtacaagatgcacgtgcgcgtg
ctgctggcgcgctaccgggcgtattcgctgtgccagagctgtggtggcgcgcgactcaac
gagcaggcccgggcgtaccgcgtgggcgggttggacttgccggggtggcacgggctggag
ctgacggaggcggtggctcggctggaggcgctgcggccgacgacggggcagggggagctg
gcgcggcgggagctgtccgcgcgcctgcgctacctgcgccgcgtgggcctgggctacctc
acgctggaccgtcaggcgcgcacgctgtccggaggcgaggcgcagcgcgtgtcgctgacg
gcggcgctgggcacgtcgctgacgggctcgctcttcgtgctggacgagcccaccgtgggc
ctccacccgggggatgtgccgccgctgacggaggccatcgccgagctggccgagcgcggc
aacatcgcgctggtgatcgagcatgacccgctggtcatccgctccgcgcatcgcgtgctg
gagctggggccgggcgcgggccgggaggggggccggctgtgcttcgacggcacgcccgag
gcgctcgcgaagcgcgaggacctgcccaccggtcggctcctcgcggggacgggggaggcg
cccaggacgccgcgcaagcgcaccggctcgctggagattcgcggggcgcgggagcacaac
ctgaaggcgctgtcggtgagcgtgccgctgggcgtgctgtgcgcggtgacgggcccgagc
ggctccggcaagagcacgctggtggatgaggtcatctaccggcacctggctcggcggctg
ggcgtgaaggacgtggaggctccgggcgcggtggacgcgctggagggcgcggaggaggtg
aagtccatcaccttcgtggaccagtctccgctggggcgcacgtcgcgcggcaacgcggcc
acgtacaccaaggcgtgggacaagctgcgagagctcttcgcctccgagccggacgcggag
gtgcgcggcctgacgccggcccacttctccttcaacgtggacaagggccgctgcgaggcg
tgctcgggtgaaggctacgagacggtggagatgcagttcctcgcggacgtggccctcctg
tgcgcggtgtgccggggccggcgcttcaaggaggaggtgctcgccgtccgtcaccagggc
ttcagcgtggcgcaggtgctggagatgacggtggcggaggtgctccagcacttcgggaag
gacaccgcgctccagcgcacgctcgggccggtggctcgcctgggcctggggtatctgccc
ctggggcagccgctgtccacgctgtcgggaggggaggcgcagcggctgaagctcgcgcgt
gccttggccagtgagtcgaaggacgcgctgttcatcatcgacgagccgagcgcgggcctt
catgcggaggacgtgcgccacgtcatcgacgcgctgcacgcgctggtggaccggggggcc
agtgtcctcgtcgtcgaccacgacgtgtcggtgatgaaggcgtcggactggatggtcgac
ctggggcccgtgggtgggcgcgacggtggacggctggtggcggaggggactcccgcggac
gtggcgcgagggaagggcgcgacggcggaggcgctccggggcgagcgtcgggcgcaagcg
cgaccgtcgaaggcacgcaaggtcgcgaaggacgcggcgccggccatcgaggtggagcac
gcgcgcgagcacaacctccaggatgtgtcctgcaagattccgctcggcaagctgaccgtc
gtcacggggccgagtggctcgggcaagagctcgctggcgttcgacgtggtgttcgcggag
gggcagcggcgcttcctggagacgctgagcccgtacgcgcgccagttcctgccgacgatg
cctcggccggacgtggagcgcgtcagctccattcctccgtccgtggcgctggagcagcgc
acctcgcgcgcgggtggcaccagcacggtggccaccgtcaccgaggtggcccactacctg
cgcctcctgttcgcgaagctgggtgagccgcactgccccaaggacgacacgcccatcacc
tccatgtcgccggagctcctcttcgcgcagctccaggcgatgaagggcgaggggacggtg
ctggctcccgcggtgagggcgcgcaagggtacctacctggatgtcttcacggccgcggcg
cgcgcgggcatcacccaggcgattgtcgacggggcgcttgcctccaccgatgacccaccg
cgcctggcgaagacgcgggagcacgacatcgacctggtcatgttcgagggcaagctctcc
aagctgccgcgagacctgttcgacaaggcgctgggctggggacagggcgcgctgaagatt
cgcgcggggaagggcgagacgctgctgtccaccgagcgcacgtgtcctcggtgcggcacc
gccgtgccggagctggacccgcgctggttctcgttcaacacgaagcagggccgctgcgac
tcgtgcgagggcacgggcatccagggtgggcccaccgcgcaggccgagggtgagaccgcg
ccgtgcaaggcgtgtggcgggagccgcctggacccggtgccgcgcggggtgcggttggaa
ggggctcgctatcacgaggtggtgcggcagtccgtcgcctccgcgctcgcgcgggtgaag
ggctggaagttcaagggtgaccgggcgctgctcggcgagccttctcgtcaggagctgctg
cggcgcatggagttcctcgagcgcgtggggctgggctacctctcgctggaccgcaacgcg
gcgtcgctgtcgggcggagagatgcagcggctgcggctgtcggcgcagctgggcgcgggc
ctcacgggggcgatgtacgtgctcgacgagcccaccatcggcctgcatcctcgcgacacc
caccggctcctcgacaaccttcgcgcgctggtgaacacgggctccacggtgctggtggtg
gagcacgactcggacaccatccgcgcggcggaccacctgctggacctgggccccacgggc
gggcgcggcggcggtcgcatcctggcggaggggcctccggacgtggtgctccagggcgac
tcgcccacggcgtatgcgctgcgcgagtcccaggtgcggcctccctccgggcgcggtgcg
ccccagaagtggatcgagctgaagggcgctcgcgcgaacaacctcaagcgcgtggacctg
cggctcccggtgggtcggctcaacgtcgtcagcggtgtctccggctccggcaagagcacg
ctggtgcggcacgtgctgtacccggcgctgcgcgaggcgctggagttggtgtcctcgaag
cccgggccgttcgactcgctgcgaggcgtggaggcggtgaagcgggtgatgtccgtggac
cagtcgcccatcggccgcacgccgcgctcggtgcccgcgacgttcctgggcatctgggat
gagctgcggcgcgccttcgccgcgacgcccgaggcgaagattcgcggcttctccgccgcg
cgcttctccttcaacacggccagcggtggacgctgcaccacctgcgagggacagggctcc
atctcccacgagatgtccttcctcccggacgtggtgacgccgtgcgaggcctgcggtggg
gcccgcttcgacgcggccacgctggagatccgctaccacggcttgtccatcggcgacgtg
ctccgcctgtccgcggacgaggccaaggacgtcttcaaggccctgccgaaggtggccgcg
ccgctgcagtgtctgtcggacctgggcgtggggtatctccagctgggccagggctccaac
acgctgtccggtggcgaggcgcagcgcttgaagctggcgtcggagctgacggcctcctcg
cggcacgagcccacgctctacgtgctcgacgaacccaccaccgggttgcatctgggggac
gtggagaagctcatcacgttcatggggcggctggtggaccggggcgacacgctggtggtc
atcgagcaccacccgtcggtcatcggcgcggcggaccacgtggtggagctggggcccgag
ggtggcgaggaggggggcctcatcgtcgcggagggcacgcctcgcgaggtggcgaaggtg
aagtccgccacgggccgggtgctgcgctcgctcttcacgaacgaggagcctgcgtcgtcg
cgacggggctcgggggcttcccggtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (29)   

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