KEGG T02436: MYSTI

Myxococcus stipitatus: MYSTI_02870

Entry

MYSTI_02870       CDS       T02436

Name

(GenBank) type II DNA topoisomerase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

msd Myxococcus stipitatus

Brite

KEGG Orthology (KO) [BR:msd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msd03032]
    MYSTI_02870
   03400 DNA repair and recombination proteins [BR:msd03400]
    MYSTI_02870
Enzymes [BR:msd01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MYSTI_02870
DNA replication proteins [BR:msd03032]
Prokaryotic type
  DNA Topoisomerases
   MYSTI_02870
DNA repair and recombination proteins [BR:msd03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MYSTI_02870

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Peptidase_S78_2 HIP1_clath_bdg

Other DBs

NCBI-ProteinID:

AGC44186

UniProt:

L7U5P1

Position

complement(3643822..3646191)

AA seq 789 aa
MRAEAEKKTPKKQGGGGGASGAAGGGGGEGFIPASLAEEARRRYINYALSVITSRALPDV
RDGLKPVQRRILYGMWNDLNLSFDTKYQKCAQVVGAIMGRYHPHGDASIYDALVRMAQDF
SLRYPLVDGHGNFGSLDGDSAAAYRYTECRLDKLATEMLGELERKTVDFRPTYDGTRNEP
IVIPARVPQLLMNGTTGIAVGMATNIPPHHLGELVDALVALIENPALLTKDLLKFVKGPD
FPTGGQILNDKKELREIYEAGQGSIRIRGEWDTEELKRGGQQIIVTSIPYTVNKSTLVAK
IGDLVRERKLPLIVDVRDESTKDVRIVLELKKDANAELVMAYLYKHTPLQTTFGVNLTCL
VPSEDNPEVGTPKRLDLKSILQYFLDFRFGVVTRRFQHELGELQKRVHLLEGFEKAYDAL
DEIIRIIRQSEGKQDAAQKLMARFKLDELQVDAILEMKLYKLARLEILVVQKELKEKRAE
IKRIEGILRDKKKVWSTVKDELGEIKGLYNDKRRTKIGGAGSEEVEFSADAFIADEDAHV
VLTRDGWVKRVREVKDPSSTRLREGDAVMTVLAGSLKANLVLFSNFGTAYVTRFNDIPAS
TGYGDPVQKLFKFDDGERVVAAWSLDPRLSAPEKLVGVTKQGMGMRFLLEPHLEVSTRAG
RRYAKTGEGDEIIGVHEAAEKDLLAVLTKKTHALVCKVAEVNELAGPGKGVTVIKVDDDD
QVVEFLVTAPNQKDARIDFETQKGRKLQLAPAKYGVTGRGGKGHEMSKRDAVADVSRNVV
FIPLPEKKD

NT seq 2370 nt +upstreamnt +downstreamnt
atgcgcgcagaagccgaaaagaagacgccgaagaagcaagggggcgggggtggagcctcg
ggcgcggcgggcggtggtggtggtgaagggttcatcccggcctcgctggccgaagaggcg
cggcgccggtacatcaactacgccctgtcggtcatcacctcacgtgccctcccggacgtg
cgcgacggcctcaagcccgtgcagcgccgcatcctgtacggcatgtggaacgacctgaac
ctgtcgttcgacacgaagtaccagaagtgcgcgcaggtcgtcggcgccatcatgggccgc
taccacccgcacggcgacgcctccatctacgacgcgctcgtgcgcatggcgcaggacttc
tccctgcgctacccgctggtggacgggcacggcaacttcggctcgctggacggcgactcg
gccgccgcctaccgctacaccgagtgccgcttggacaagctggccaccgagatgctcggc
gagctcgagcgcaagacggtggacttccggcccacctacgacggcacccgcaacgagccc
atcgtcatccccgcgcgcgtgccccagctgttgatgaacggcaccacgggcatcgccgtg
ggcatggccaccaacatcccgccccaccacctgggcgagctggtggacgcgctggtcgcc
ctcatcgagaaccccgcgctgcttacgaaggacctgctcaagttcgtcaagggcccggac
ttccccacgggcgggcagatcctcaacgacaagaaggagctgcgggagatctacgaggcg
ggccagggcagcatccgcatccggggcgagtgggacaccgaggagctcaagcgcggtggc
cagcagatcatcgtcacctccatcccgtacacggtgaacaagtccacgctggtcgcgaag
atcggcgacctggtgcgcgagcggaagctgccgctcatcgtcgacgtgcgcgacgagtcc
accaaggacgtgcgcatcgtcctggagctcaagaaggacgccaacgccgagctggtgatg
gcgtacctctacaagcacacgccgctgcagacgacgttcggcgtcaacctcacgtgcctg
gtccccagcgaggacaacccggaggtcggcacgcccaagcggttggacctcaagtccatc
ctccagtacttcctcgacttccgcttcggcgtcgtcacgcgccgcttccagcacgagctg
ggcgagctgcagaagcgcgtccacctgctcgagggcttcgagaaggcctacgacgcgctg
gatgaaatcatccgcatcatccgccagtccgagggcaagcaggacgcggcccagaagttg
atggcgcgcttcaagctggacgagctccaggtggacgccatcctggagatgaagctctac
aagctggcccgcctggagattctggtcgtccagaaggagctcaaggagaagcgcgcggag
atcaagcgcatcgagggcatcctccgcgacaagaagaaggtctggtccaccgtcaaggac
gagctgggtgagatcaagggcctgtacaacgacaagcgccgcacgaagattggtggcgcg
ggctccgaggaagtggagttcagcgcggacgcgttcatcgcggacgaggacgcccacgtg
gtcctcacccgcgacggctgggtcaagcgcgtgcgcgaggtgaaggacccgtcctccacc
cgtctgcgcgagggcgacgcggtgatgacggtgctggccggcagcctcaaggccaacctg
gtgctgttcagcaacttcggcaccgcctacgtcacgcgcttcaacgacatccccgcgtcc
acgggctacggcgacccggtgcagaagctgttcaagttcgacgacggcgagcgcgtggtg
gccgcgtggtcgctggacccccggctgtccgctccggagaagctcgtcggcgtgacgaag
cagggcatgggcatgcgcttcctgctggagccgcacctggaggtctccacccgcgcgggc
cgtcgctacgcgaagacgggcgagggcgatgagatcatcggcgtgcacgaggcggcggag
aaggacctgctcgcggtgctgaccaagaagacccacgccctggtgtgcaaggtggcggag
gtcaacgagctggcgggcccgggcaagggcgtcaccgtcatcaaggtggatgacgacgac
caggtggtggagttcctcgtcaccgcgcccaaccagaaggacgcgagaatcgatttcgag
acgcagaagggccgcaagctgcagctcgcccccgcgaagtacggggtgacgggccgcggc
ggcaagggccacgagatgtccaagcgcgacgcggtggcggacgtgagcaggaacgtcgtc
ttcatcccgttgcccgagaagaaggactag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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