KEGG   Myxococcus stipitatus: MYSTI_03397
Entry
MYSTI_03397       CDS       T02436                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
msd  Myxococcus stipitatus
Pathway
msd00230  Purine metabolism
msd00240  Pyrimidine metabolism
msd01100  Metabolic pathways
msd01232  Nucleotide metabolism
Module
msd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
msd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:msd00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    MYSTI_03397
   00240 Pyrimidine metabolism
    MYSTI_03397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msd03400]
    MYSTI_03397
Enzymes [BR:msd01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     MYSTI_03397
DNA repair and recombination proteins [BR:msd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    MYSTI_03397
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N Ribonuc_red_lgN RuvA_C
Other DBs
NCBI-ProteinID: AGC44709
UniProt: L7UE44
Position
complement(4282086..4284878)
AA seq 930 aa
MEKELSAKPMVNGKERRAGRSKGKAAATGLSVERFFTTLGVDPADELAWEYRSASITGED
GKAVFEQKNIEVPRSWSMLATNVVASKYFRGTPGTPERETSVRKLVARVVDTLTRWGSDG
GYFATELDRDAFHAELTHLLLRQKASFNSPVWFNVGVEAQPQCSACFINSVDDSMESILT
LARTEGMLFKYGSGTGSNLSTIRGSKELLAGGGTASGPVSFMRGFDAFAGVIKSGGKTRR
AAKMVILNADHPDVLDFIRCKASEEKKAWALIEAGYDPSFNGEAYASVYFQNSNNSVRVT
DEFMKAVVADGAWQTRTVREGQPLDTYRARDLFREIAEAAHLCGDPGMQFDTTVNSWHTC
SGTARINASNPCSEYMFLDDSACNLASLNLMHFRDIAGDFDVAAFKHAVDVVLLAQEIIV
GFSRYPTERIGKNSHDYRPLGLGFANLGALLMASGLPYDSDAGRNYASAITSLMCGEAYA
MSARMAEKQGPFNGYAKNAEPMLGVIRKHRKAAYAVPQAGVMAELHAEQKAAWDDALALG
EAHGYRNSQVTVLAPTGTIGFMMDCDTTGIEPDIALIKYKKLVGGGMLKLVNQTVPQALE
KLGYPQTQAQDIVSALDKADTIEGAPHLRPEHLAVFDCAFKPAKGSRSIHWMGHIQMMEA
CQPFLSGAISKTVNMPSDSTVEDIEKAYLESWKRGLKAVAVYRDGCKRTQPLNTSKEAVK
DTRKVEAAAVVEPLVKPEPRAVRRRLPDERRSITHKFSIGGHEGYLTVGMYEDGTPGELF
IVMAKEGSVVSGLMDSFATSISLALQYGVPLKVMVDKLSHTRFEPSGFTGNPAIPIAKSI
TDYIFRWLELKFMPSEETEEDAILSPEPAAPTAQPALPAQSASFSRSTSSARATWLNQAD
APPCHTCGAIMVRSGACYKCGNCGATSGCS
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggagaaggagctgagtgcgaagcccatggtgaacgggaaggagcgccgggcggggcga
agcaaggggaaggcggcggcgacggggctgagcgtggagcgcttcttcacgacgctgggg
gtggaccccgcggacgagctggcgtgggagtaccggagcgcgagcatcacgggcgaggac
ggcaaggccgtcttcgagcagaagaacatcgaggtgccgcgctcgtggtcgatgctggcg
acgaacgtggtggcgtccaagtacttccgcggcacgccggggacgcccgagcgggagacg
agcgttcgcaagctggtggcgcgcgtggtggacaccctcacccgctggggctcggacggc
ggctacttcgccaccgagctggaccgcgacgccttccacgcggagctgacgcacctgctg
ttgcgccagaaggcctcgttcaactcgcccgtctggttcaacgtgggcgtggaggcgcag
ccgcagtgctcggcgtgcttcatcaacagcgtggatgactccatggagtccatcctcacg
ctggcgcgcacggagggcatgctcttcaagtacggcagcggcacgggcagcaacctgtcc
accatccgcggcagcaaggagctcctcgccggtggcggcaccgcgtccgggcccgtgtcg
ttcatgcgtggcttcgacgccttcgcgggggtcatcaagagcggaggcaagacgcgccgc
gcggcgaagatggtcatcctcaacgcggaccatccggacgtcctcgacttcatccggtgc
aaggcgagcgaggagaagaaggcctgggcgctcatcgaggccggctatgacccgtcgttc
aacggcgaggcgtacgcgtcggtgtacttccagaactcgaacaactcggtgcgggtcacc
gacgagttcatgaaggccgtcgtggcggatggcgcgtggcagacgcgcacggtgcgagag
ggccagccgctggacacgtaccgggcgcgggacctgttccgcgagatcgccgaggccgcg
cacctgtgcggcgacccggggatgcagttcgacaccacggtgaacagctggcacacgtgc
tcgggcacggcgcgcatcaacgcgtccaatccgtgctcggagtacatgttcctggatgat
tcggcgtgcaacctggcgtcgctgaacctgatgcacttccgggacatcgccggtgacttc
gacgtggcggccttcaagcacgcggtggacgtggtgctgctggcgcaggagatcatcgtc
ggcttctcgcgctaccccaccgagcgcatcgggaagaacagccacgactaccgtccgctg
gggctggggttcgcgaacctgggcgcgctgctgatggcgtcgggtctgccctatgactcg
gacgcgggccgcaactacgcgtccgccatcacctcgttgatgtgcggcgaggcgtacgcg
atgagcgctcgcatggcggagaagcagggcccgttcaatgggtacgcgaagaacgcggag
cccatgctgggggtcatccggaagcaccgcaaggcggcatatgccgtgccccaggccgga
gtgatggcggagctgcacgcggaacagaaggcggcgtgggatgacgcgctggccctgggc
gaggcccatggctatcgcaacagccaggtgacggtgctcgcgcccacggggaccatcggc
ttcatgatggactgcgacaccacgggcatcgagccggacatcgcgctcatcaagtacaag
aagctggtgggcggcggcatgctgaagctcgtcaaccagacggtgccgcaggcgttggag
aagctgggctatccgcagacgcaggcgcaggacatcgtgagcgcgctggacaaggcggac
acgattgaaggcgcccctcacctgcggcccgagcacctcgcggtgttcgactgtgccttc
aagccggcgaagggctctcggagcatccactggatggggcacatccagatgatggaggcg
tgccagccgttcctgtctggtgccatctcgaagacggtgaacatgccgtcggactcgacg
gtggaggacatcgagaaggcgtatctcgagtcctggaagcgcggcctcaaggcggtcgcc
gtgtatcgcgatggctgcaagcggacgcagccgctgaacacgtcgaaggaggcggtgaag
gacacgcggaaggtggaggcggcggccgtcgtcgagccgctggtgaagccggagcctcgt
gcggtgcggcggcgcctgccggacgagcggcggtccatcacgcacaagttctccatcggc
ggccatgagggctacctcacggtgggcatgtacgaggacggcacgccgggcgagctgttc
atcgtcatggcgaaggaaggctcggtggtgagcgggctgatggacagcttcgcgaccagc
atctccctggcgctccagtacggcgtgccgctgaaggtgatggtcgacaagctgagccac
acccgcttcgagccgagtggcttcaccggcaaccccgccatccccatcgccaagtccatc
accgactacatcttccggtggctggagctgaagttcatgcccagcgaggagaccgaggag
gatgccatcctctcccccgagccggcggcccccacggcccagcccgcgctgcccgctcag
tcagcctcgttctctcgctccacgagcagtgcccgcgccacctggttgaaccaggcggac
gccccgccctgccacacatgtggcgccatcatggtgcgcagcggcgcttgctataagtgc
ggcaattgcggcgcgaccagcggctgtagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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