KEGG   Mycolicibacterium smegmatis MC2 155: MSMEI_0444
Entry
MSMEI_0444        CDS       T02191                                 

Definition
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
msg  Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:msg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msg03032]
    MSMEI_0444
   03400 DNA repair and recombination proteins [BR:msg03400]
    MSMEI_0444
Enzymes [BR:msg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MSMEI_0444
DNA replication proteins [BR:msg03032]
 Prokaryotic type
  DNA Topoisomerases
   MSMEI_0444
DNA repair and recombination proteins [BR:msg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MSMEI_0444
SSDB
Motif
Pfam: DNA_gyraseB_C DNA_gyraseB Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AFP36925
UniProt: A0QPN2
Position
complement(533759..535792)
AA seq 677 aa
MSYTAADITELDDVQHTRLRPAVNLGLDVLNTALREIVDNAIEEVADPGHGGSTVTITLH
ADGSVSVADDGRGLPVDTDPTTGKNGIVKTLGTARAGGKFSAHKDATSTGAGLNGIGAAA
AVFISARTDVTVRRDGKTFLQSFGRGYPGVFEGKEFDPEAPFTRNDTQKLRGVSNRKPDL
HGTEVRILFDPAIAPDSTLDIGEVLLRAHAAARMSPGVHLVVVDEGWPGEEVPPAVLEPF
SGPWGTDTLLDLMCTAAGTPLPEVRAVVEGRGEYTTGRGPTPFRWSLTAGPAEPATVAAF
CNTVRTPGGGSHLTAAIKGLSEALAERASRMRDLGLAKNEEGPEPQDFAAVTALAVDTRA
PDVAWDSQAKTAVSSRSLNLAMAPDVARSVTIWAANPANADTVTLWSKLALESARARRSA
EGAKARARAASKAKGLGTNLSLPPKLLPSRESGRGSGAELFLCEGDSALGTIKAARDATF
QAAFPLKGKPPNVYGFPLNKARAKDEFDAIERILGCGVRDHCDPELCRYDRILFASDADP
DGGNINSSLISMFLDFYRPLVEAGMVYVTMPPLFVVKAGDERIYCQDESERDAAVAQLKA
SSNRRVEVQRNKGLGEMDADDFWNTVLDPQRRTVIRVRPDESEKKLHHTLFGGPPEGRRT
WMADVAARVDTSALDLT
NT seq 2034 nt   +upstreamnt  +downstreamnt
gtgagttacaccgccgcagacatcaccgagctcgacgatgtccagcacacgcggctgcgg
ccggcggtgaacctgggcctcgacgtgctcaacaccgccctgcgcgagatcgtcgacaac
gcgatcgaggaggtcgccgatcccggccacggcgggtcgaccgtcacgatcaccctgcac
gccgacggttcggtcagcgtcgccgacgacggccgcggcctgcccgtcgacaccgacccg
accaccgggaagaacggcatcgtcaagacgctgggcacagcccgcgccggcggcaagttc
tccgcgcacaaggacgccaccagcaccggcgccggcctcaacggcatcggcgcggcggcc
gcggtgttcatctccgcgcgcaccgacgtcacggtgcgccgtgacggcaagacctttctg
cagagcttcggccgcggttatccgggcgtgttcgagggcaaggagttcgacccggaggcc
ccgttcacccgcaacgacacccagaaactgcgcggcgtcagcaaccgcaagcccgacctg
cacggcaccgaggtgcgcatcctgttcgaccctgcgatcgcgccggactcgaccctggac
atcggcgaggtgctgctgcgcgcacacgccgcggcgcggatgtcgcccggcgtgcacctg
gtcgtcgtcgacgagggctggcccggcgaagaggtcccgccggcggtgctcgaaccgttc
agcgggccgtggggcaccgacaccctgctcgacctcatgtgcaccgcggcgggcactccc
ctgcccgaggtccgcgccgtcgtggaaggccgcggcgagtacaccacgggccgcggaccg
accccgttccgctggtcgctgacggccggaccggccgaaccggcgacggtcgccgcgttc
tgcaacaccgtgcgcacacccggcggcggatcgcacctgaccgccgcgatcaagggtctg
tccgaggcgttggccgagcgcgcgtcccgcatgcgcgatctgggcctggccaagaacgaa
gaaggcccggaaccacaggatttcgcggccgtgaccgcactggccgtggacacccgcgca
ccggacgtcgcgtgggattcgcaggccaagaccgcggtgtcgtcgcgctcgctgaacctg
gcgatggccccggatgtggcgcgcagcgtgacgatctgggcggccaaccccgccaacgcc
gacaccgtgacgctgtggagcaagctggcactggagtccgcgcgcgcccgccgcagcgcc
gagggcgccaaggcccgcgcccgtgcggcatcgaaggccaaaggtctcggtaccaacctg
tcgctgccgcccaagctgctgcccagccgcgagtcgggccgtggttcgggcgccgaactg
ttcctctgcgagggcgattcggctctgggcaccatcaaggccgcgcgcgacgcgacgttc
caggccgcgttcccgctgaaaggcaagccgcccaacgtctacggtttcccgttgaacaag
gcgcgggccaaagacgagttcgacgcgatcgagcgcatcctgggctgcggcgtgcgcgac
cactgcgacccggaactgtgccggtacgaccggatcctgttcgcctccgacgccgacccc
gacggtggcaacatcaactcgagcctgatctcgatgttcctggacttctaccgtccgctc
gtcgaagccgggatggtgtacgtgaccatgccgccgctgttcgtggtgaaggcaggcgac
gagcggatctactgccaggacgagtccgaacgcgacgcggccgtggcccagttgaaggcg
tcctccaaccgacgcgtggaggtacagcgcaacaagggtctcggtgagatggacgccgac
gacttctggaacaccgtgctggatccgcagcgccgcacggtgattcgggtacgccccgac
gagagcgagaagaagctgcaccacacgttgttcggcggaccgccggagggccggcgcacg
tggatggccgatgtcgccgcccgcgtcgacacctccgcgctggacctgacgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system