KEGG   Mycolicibacterium smegmatis MC2 155: MSMEI_5935
Entry
MSMEI_5935        CDS       T02191                                 
Symbol
lysS1
Name
(GenBank) Lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
msg  Mycolicibacterium smegmatis MC2 155
Pathway
msg00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:msg00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    MSMEI_5935 (lysS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:msg01007]
    MSMEI_5935 (lysS1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:msg03016]
    MSMEI_5935 (lysS1)
Enzymes [BR:msg01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     MSMEI_5935 (lysS1)
Amino acid related enzymes [BR:msg01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   MSMEI_5935 (lysS1)
Transfer RNA biogenesis [BR:msg03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    MSMEI_5935 (lysS1)
 Prokaryotic type
   Other AARSs
    MSMEI_5935 (lysS1)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AFP42368
UniProt: I7FU37
Position
complement(6157855..6159411)
AA seq 518 aa
MRSRVHLSWDFVTPADRDDTSQPQADIPEQFRIRQEKRERLLAQGHDPYPVKVDRTHTLA
ELRRAHPDLAADTATGQIVGVSGRVVFARNSGKLCFATLQEGDGTQLQVMISLAQVGQEA
LDSWKSDVDLGDIVFVHGEVISSKRGELSVLADRWQMAAKALRPLPVAHKEMSEEARVRQ
RYVDLIVRPEARTIARQRVAVVRAVRSALERRGFLEVETPMLQTLAGGAAARPFITHSNA
LDIDLYLRIAPELFLKRCLVGGFEKVFELNRNFRNEGVDSTHSPEFAMLETYQAYGDYND
SATVTRELIQEVADEAIGTRQVPLPDGTVYDLDGEWDTVEMYPSLSEALGDEITPETPVE
KLWQIADRLEVEIPRDRGYGHGKLIEELWEHTVGDKLWAPTFVRDFPVETTPLTRAHRSI
PGVTEKWDLYVRKFELATGYSELIDPVIQRERFEAQARAAAAGDDEAMVLDEDFLAALEF
AMPPTTGTGMGIDRLMMALTGLSIRETVLFPIVRRHSN
NT seq 1557 nt   +upstreamnt  +downstreamnt
gtgcgttcacgcgttcatttaagctgggatttcgtgaccccagccgatcgtgacgacacg
tcccagccccaggccgatatccccgagcagttccgaatccgtcaggagaagcgggagcgg
ctgctggcgcaggggcacgatccgtacccggtgaaggtcgatcgcacccacacgctggcc
gaactgcgccgcgcccaccccgacctggccgccgacaccgcgaccggccagatcgtcggg
gtctccggccgcgtggtgtttgcccgcaactcgggcaagttgtgcttcgcgaccctgcag
gagggcgacggcacccaactgcaggtgatgatcagcctcgctcaggtgggccaggaggca
ctcgactcctggaagagtgacgtggacctcggtgacatcgtgttcgtccacggcgaagtc
atcagttccaagcgtggcgaattgtcggtgctggccgacagatggcagatggcggcaaag
gcgctgcggccacttccggttgctcacaaagaaatgagcgaagaagcgcgcgtgcgtcag
cgctatgtcgacctcatcgtccggcccgaggcccgcaccatcgcccgccagcgcgtcgcg
gtggtccgcgctgtgcgttcggcgctcgaacggcgcggattcctcgaggtcgagaccccg
atgctgcagacgctcgccggcggtgccgccgcgcgcccgttcatcacgcactccaatgcg
ctcgacatcgatctgtacctgaggatcgcgccggaactgttcctcaagcgctgcctcgtg
ggcggatttgagaaggttttcgagttgaatcgcaactttcgcaatgagggtgtggattcc
acacactcgccggaattcgcgatgttggagacatatcaggcttacggtgactacaacgat
tccgcgaccgtcacccgagaacttattcaagaggtcgccgacgaagcgatcggcacgcgt
caggtgccattgcccgatggcacggtctacgatctcgacggtgaatgggacacggtggaa
atgtacccatcgctgtcggaggcactcggtgacgagatcactcccgagaccccggtcgag
aagttgtggcagattgcggatcgacttgaggtcgagattccgcgtgaccgcggttacggt
cacgggaaattgatcgaagaactatgggaacacacggtcggtgacaagttgtgggccccg
acgttcgtgcgcgacttccccgtcgagacgactccactcacccgagcgcatcgcagcatt
ccaggggtcaccgagaagtgggacctgtatgtgaggaaattcgaactcgccacgggatac
tccgaactcatcgacccggtaatccagcgcgagcgtttcgaggcccaggcccgcgccgcc
gccgccggcgacgacgaggcaatggttctcgacgaggatttcctggccgcattggagttc
gcgatgccgccgaccacgggaaccggaatgggcatcgataggttgatgatggcgttgaca
gggttgtctattagggagaccgttttgttcccgattgttcggcgtcacagcaactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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