KEGG   Mycolicibacterium smegmatis INHR2: LI98_04375
Entry
LI98_04375        CDS       T03432                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
msh  Mycolicibacterium smegmatis INHR2
Pathway
msh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LI98_04375 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msh03019]
    LI98_04375 (groEL)
   03110 Chaperones and folding catalysts [BR:msh03110]
    LI98_04375 (groEL)
   03029 Mitochondrial biogenesis [BR:msh03029]
    LI98_04375 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msh04147]
    LI98_04375 (groEL)
Enzymes [BR:msh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     LI98_04375 (groEL)
Messenger RNA biogenesis [BR:msh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LI98_04375 (groEL)
Chaperones and folding catalysts [BR:msh03110]
 Heat shock proteins
  HSP60 / Chaperonin
   LI98_04375 (groEL)
Mitochondrial biogenesis [BR:msh03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    LI98_04375 (groEL)
Exosome [BR:msh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LI98_04375 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   LI98_04375 (groEL)
  Exosomal proteins of breast cancer cells
   LI98_04375 (groEL)
  Exosomal proteins of colorectal cancer cells
   LI98_04375 (groEL)
  Exosomal proteins of bladder cancer cells
   LI98_04375 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AIU19388
Position
965548..967173
AA seq 541 aa
MAKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEKVTETLLKSAKEVETKEQIAATAGISAGDQSIGDLIAEAMDKVGNEGVITVEESNT
FGLQLELTEGMRFDKGYISGYFVTDAERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVIS
EEVGLSLETADVSLLGKARKVVVTKDETTIVEGAGDAEAIQGRVAQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQS
APSLEELSLTGDEATGANIVRVALSAPLKQIALNGGLEPGVVAEKVSNLPAGHGLNAATG
EYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAVVADKPEKAAAPAGDPTGGMGGMD
F
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggctaagacaattgcgtatgacgaagaggcccgtcgcggcctcgagcggggcctcaac
agcctcgccgacgcggtaaaggtgacgctgggccccaagggtcgcaacgtcgtcctggag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccctacgagaagatcggtgctgagctcgtcaaagaggtcgccaagaagacc
gacgatgtcgctggcgacggcaccaccaccgccaccgtcctggctcaggccctggttcgc
gaaggcctgcgcaacgtcgctgccggcgccaacccgctcggcctgaagcgcggcatcgag
aaggccgtcgagaaggtcaccgagaccctgctgaagtccgccaaggaggtggagaccaag
gagcagatcgctgccaccgccggtatctccgccggtgaccagtccatcggcgacctgatc
gccgaggccatggacaaggtcggcaacgagggtgtcatcaccgtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggtatgcgcttcgacaagggctacatctcgggt
tacttcgtgaccgacgccgagcgtcaggaagcggtcctcgaggatccctacatcctgctg
gtcagctcgaaggtctcgaccgtcaaggacctgctgccgctgctggagaaggtcatccag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaagccctgtcgaccctg
gtggtcaacaagatccgcggcaccttcaagtcggtcgccgtcaaggcccccggcttcggt
gaccgccgcaaggcgatgctgcaggacatggccatcctcaccggtggtcaggtcatcagc
gaagaggtcggcctgtccctggagaccgctgacgtctcgctgctgggcaaggcccgcaag
gtcgtcgtgaccaaggacgagaccacgatcgtcgagggtgccggcgacgccgaggccatc
cagggccgcgtcgcgcagatccgcgccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggcggtgttgcggtcatcaaggccggt
gctgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggcggcgtggccctgctgcagtcg
gctccgtcgctggaggagctgtcgctcaccggtgacgaggcgaccggcgccaacatcgtg
cgcgtcgcgctgtcggccccgctgaagcagatcgccctcaacggtggtctggagccgggc
gtcgtcgccgagaaggtgtcgaacctgcccgcgggtcacggcctgaacgccgcgaccggt
gagtacgaggacctgctggccgccggcgttgccgacccggtcaaggtcacccgctcggcg
ctgcagaacgctgcgtcgatcgcggctctgttcctcaccaccgaggctgttgtcgccgac
aagccggagaaggccgccgcacctgcgggcgacccgaccggtggcatgggtggcatggac
ttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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