KEGG   Methanobrevibacter smithii: Msm_0607
Entry
Msm_0607          CDS       T00539                                 
Name
(GenBank) predicted ATPase, RNase L inhibitor family
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
msi  Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:msi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msi03009]
    Msm_0607
Ribosome biogenesis [BR:msi03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    Msm_0607
SSDB
Motif
Pfam: ABC_tran SMC_N RLI Fer4 AAA_21 RsgA_GTPase Rad17 nSTAND3 AAA_24 Fer4_6 Fer4_7 Fer4_21 Fer4_2 Fer4_10 AAA_23 Fer4_9 MukB AAA_29 Fer4_16
Other DBs
NCBI-ProteinID: ABQ86812
UniProt: A5UKT4
Position
577478..579256
AA seq 592 aa
MSRISILDKDKCQPKKCNFVCIDYCPGVRMDEDTIIIDEDTNKPLISEELCEGCGICTNR
CPFDAISIINLPEAIGEPIHRFGQNQFELFGLPSLTEGSVLGLLGPNGIGKSTIMNILSG
TLIPNLGDYENPQDNWDKVIEHYKGSALQNYFTKLAAGEIKAVLKPQMVDQLPKVVKGKV
SDLLTNVDERGKLDYVCDELDLHNVLDREMKNLSGGELQRVAIAATVLREGDFYYFDEPT
SWLDVSQRLNAVKVIRSLAQDGKSVLVIEHDLATLDALSDNIHVLFGEPGGYGVVSGRKG
VRIGINAYINGFLAEENVRIRRNPIEFTIRPPTPEDEGESLSSYSDLSKDYDGFKLTADA
GEIFHDEIVTAFGSNGIGKTTFAKMLAGVEEPTSGEVDTEVTIAYKPQYIVSDFEGTVSD
FLYMNAPSFGSNIFKSEIMEPFKLEDMLEKEVKKLSGGELQRLAIAATLSKDAEIYLFDE
PTAFLDVEQRLIAARVIRKMVESRNAASLIVDHDIVFIDYISDRAMVFNGTPGLEGHASK
PTDLRTSMNEFLGNLNITFRRDKETKRPRVNKLDSYLDREQKEKGEYYYLSD
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgagtcgtatttctatattagacaaagacaaatgtcaacctaagaaatgtaatttcgtt
tgtattgattactgcccaggagtcagaatggatgaagacacaatcatcattgatgaagac
actaacaaaccattgatttctgaagaattatgtgaaggatgcggtatttgtacaaacaga
tgtccatttgatgctatttcaattattaacttacctgaagctataggagaaccaattcac
agattcggacaaaaccagtttgaactatttggacttcctagtttaactgaaggtagtgtt
ttaggtttgctcggtccaaatggaatcggtaaatcaacaataatgaacatactgtccgga
actttaattccaaacttaggagattatgaaaaccctcaagataattgggacaaagtaatt
gaacattataaaggttcagctcttcaaaactactttacaaaattagccgctggagaaata
aaagctgttttaaaacctcaaatggtggatcagcttccaaaagttgtaaaaggaaaagta
agtgatttgcttacaaatgttgatgaaagaggaaaattggattatgtctgtgatgaatta
gaccttcataatgttttagaccgtgaaatgaaaaacttaagtggtggggaactccaaaga
gtagctatagctgcaactgtcttaagagaaggagacttctattactttgacgaacctaca
tcctggctggatgtttcacaaaggttaaatgcagtaaaagtaatccgttcacttgctcaa
gacggcaaaagtgttttagttattgaacacgatttggctactttagatgcattgtccgac
aatatccatgttttatttggtgaacctggaggatatggtgttgtatcaggtagaaaaggt
gttagaattggaatcaatgcatacatcaacggatttttagctgaagaaaatgtaaggata
agaagaaatcctattgaatttacaatcagaccaccgactcctgaagatgaaggagaatca
ctgtccagctattctgatttaagtaaggattatgacggattcaaattaactgcagatgct
ggagaaatattccacgacgaaatcgtaactgcatttggttcaaatggtataggaaaaacc
actttcgccaaaatgctggcaggagtagaagaaccgacaagcggagaagtagacacagaa
gttacaatagcttacaaaccacaatatatagtttctgattttgaaggaactgttagtgac
ttcctgtacatgaatgctccaagtttcggaagcaacatctttaaaagcgagattatggaa
ccttttaaattagaagatatgcttgaaaaagaagttaaaaagttaagtggtggggaactc
caaagacttgcaatagctgcaacactttcaaaagatgctgaaatttatcttttcgatgaa
cctactgcatttttagatgtggaacaaagattaatagctgcaagagttattagaaaaatg
gttgaaagcagaaatgcagcatcacttattgtagaccacgatattgtatttatcgattat
atctcagacagggcaatggtatttaacggtactcccggtttagaaggtcatgcatccaaa
ccgacagatttaagaacttccatgaacgaatttttaggaaatctaaatattactttcaga
agagataaagaaacaaaaagaccaagagttaataaattagacagctatcttgatcgtgaa
caaaaagaaaaaggagaatattattacttatcagattaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (38)   

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