KEGG   Methylocella silvestris: Msil_0595
Entry
Msil_0595         CDS       T00802                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
msl  Methylocella silvestris
Pathway
msl03420  Nucleotide excision repair
msl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Msil_0595
   03430 Mismatch repair
    Msil_0595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msl03400]
    Msil_0595
Enzymes [BR:msl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Msil_0595
DNA repair and recombination proteins [BR:msl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Msil_0595
   MMR (mismatch excision repair)
    Other MMR factors
     Msil_0595
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 PcrA_UvrD_tudor DUF3553 AAA_11
Other DBs
NCBI-ProteinID: ACK49567
UniProt: B8ELH8
Position
complement(643059..645431)
AA seq 790 aa
MTDPFSLSETDAPAPQPGGIAARARAAAGGRRYLDGLNPEQRAAVEAIDGPVLVLAGAGT
GKTRVLTTRIAHILAEGRARAHEILAVTFTNKAAREMRDRVALLAGPVGEGMPWLGTFHA
ISTKILRRHAELVGLKSSFTILDTDDQIRLLKQVLKAEDIDDKRWPARSLAYQIDAWKNR
GLDPAHVPAGEAAAFANGKGGRLYALYQERLKILNAADFGDLLLETLRLFKENPDVLKQY
QDRFKYMLVDEYQDTNTVQYLWLRLLAQGRHNVCCVGDDDQSIYGWRGAEVDNILRFESD
FPGAKVIRLERNYRSTGHILAVAAGLIAHNQGRLGKTLFTDDEAGLMPTVTGVWDSEEEA
RGIGEEIEQLARKGHAYDEVAILVRASFQMREFEERFITLGLPYRVIGGPRFYERAEIRD
ALAYLRCVAQPADDLAFERIYNTPRRGLGESTLQQLHEYGRLQRVPLIEAARFMIETDEI
KPKQRQALRDLLANFSRWASLIGEKPHGELTEMILEESGYTDMWRKDRTAEAAGRLENLK
ELVRAMEEFPDLAAFLEHISLVMEAETKDAGPRVSIMTLHAAKGLEFETVFLPGWEEGLF
PHQRSLDESGRAGLEEERRLAYVGITRARRRAKIYFATNRRIHGLWQTTIPSRFLDELPP
DHVEVVEAATGAAYGGYAQSRFANMDSFGSTYGTPGWRRAQRRTEETRAESGASSGGGFA
RKTSQRGPMQIEGELIAKSSASSAFAKGARVFHQKFGYGAVAAVDGNKLTVDFDKAGRKM
VLESFVEAKG
NT seq 2373 nt   +upstreamnt  +downstreamnt
ttgaccgatcctttttcgctctccgagaccgatgcgccggcgccgcagcccggcggcatc
gccgcgcgcgctcgggcggcggcgggcggacggcgctatctcgacggtctgaaccctgag
cagcgcgccgccgtcgaggcgatcgacggtccggttctcgtgctggccggcgccggcacg
ggcaagacgcgcgtgctgacgacgcgcatcgcccatattctcgccgagggccgggcgcgc
gcgcatgaaattctcgccgtgaccttcaccaataaggccgcgcgcgaaatgcgcgaccgc
gtcgcccttctcgccggccctgtgggcgaaggcatgccctggctcggcaccttccacgcc
atttcgaccaagatcctgcgccgccacgccgaactcgtcgggctgaagtcgagctttacc
attctcgacacggacgatcagattcgcctcctgaagcaggttctgaaggccgaagacatc
gacgacaagcgctggccggcgcgctcgctcgcctatcagatcgacgcgtggaaaaatcgc
ggcctcgatccggcccatgttccagccggggaggcggctgctttcgccaatggcaagggc
ggccggctctatgcgctctatcaggagcgcctcaagatcctcaacgcggccgatttcggc
gatctactgctcgaaaccttgcggctcttcaaggaaaaccccgacgtcctgaagcagtat
caggaccgcttcaaatatatgctcgtcgatgaatatcaggacaccaatacggtccaatat
ctctggctgcggctgctggcgcagggccgacacaatgtctgctgcgttggcgacgacgac
cagtcgatctatggctggcgcggcgccgaggttgataatattttgcggtttgagagcgat
tttcccggcgcgaaggtgatccggctcgaacgtaattaccgctcgaccgggcatatcctc
gctgtcgccgccggcctcatcgcgcataatcagggtcggctcggcaagacgctattcacc
gacgacgaagccgggctgatgccgacggtcaccggcgtctgggattcggaagaagaggcg
cgcgggatcggcgaggagatcgagcaactggcgcgcaagggccacgcttatgacgaggtc
gcgatcctcgtgcgcgcctcgttccagatgcgcgaattcgaggagcgcttcatcacgctc
gggctgccctatcgcgtcatcggcggcccgcgcttttatgagcgcgccgaaatccgcgac
gcgctcgcctatctccgctgcgtcgcccagccggccgatgatctcgccttcgaacgcatc
tacaacacgccacggcgcggccttggcgagagcacgctgcaacagctgcatgaatatggc
cggctgcagcgggttccgctcatcgaggccgcgcgcttcatgatcgaaaccgatgagatc
aagccgaagcagcgccaggctttgcgcgatcttctggcgaatttttcgcgctgggcttcg
ctgatcggcgagaagccgcatggcgaactcacagaaatgattctggaggaatccggctat
accgacatgtggcgcaaggaccgcaccgccgaggcggcgggacggctcgaaaatctgaaa
gagctcgtccgcgccatggaagagtttccggaccttgccgccttcctcgaacatatttcg
ctggtgatggaggccgagacgaaggacgccggcccccgcgtctcgatcatgaccttgcac
gcggccaagggcctcgaattcgaaacggtttttctgcccggctgggaggaggggctgttt
ccgcatcagcgctcgctcgatgaatccggcagggcggggctcgaggaggagcgccgcctc
gcctatgtcgggatcacgcgcgcaaggcggcgtgcgaaaatctatttcgccaccaaccgc
cgcatccatggcctgtggcaaacgacgattccctcacgatttctcgatgagcttccgccc
gatcatgtcgaggtggtcgaggcggcgacgggcgcggcctatggcggctatgcgcaatcg
cgcttcgccaatatggatagtttcggctcgacctatggcacacccggctggcgccgtgcg
cagcgccgcacggaggagacgcgcgccgaaagcggcgcctcaagcggcggcggctttgcg
cgcaaaacgtcgcaacgcgggccgatgcagatcgagggcgaattgatcgcaaaatcgagc
gcgtcatcggcctttgcaaagggcgcgcgcgtattccaccagaaattcggctatggcgca
gtggccgcggtcgacggcaacaagctgacggtggatttcgacaaggctggacgcaaaatg
gtgttggagagctttgtcgaggcgaaggggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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