KEGG   Methylocella silvestris: Msil_1001
Entry
Msil_1001         CDS       T00802                                 
Name
(GenBank) Uracil-DNA glycosylase superfamily
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
msl  Methylocella silvestris
Pathway
msl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Msil_1001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msl03400]
    Msil_1001
Enzymes [BR:msl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Msil_1001
DNA repair and recombination proteins [BR:msl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Msil_1001
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ACK49970
UniProt: B8EK23
Position
1083402..1084088
AA seq 228 aa
MALDRSAAAVALRVLEPPIDCPLCPRLAALRRSLREEQPGWSNAPVPTFGDPSAPVLIVG
LAPGLRGANRTGRPFTGDYAGDLLYSTLLAYGFATGVYGASRDDGLRLRDCAISNAVRCV
PPQNKPTPEEIATCRSFLKATLERSAHLSVVVALGRIAHESILRALGAKLSAFPFAHGAE
HKLPRANGRDLALFDSYHCSRYNTNTGVLTPQMFADVFAAVRRRADAG
NT seq 687 nt   +upstreamnt  +downstreamnt
atggcattggatcgttccgccgccgctgtcgcgctccgcgtgctcgaaccgccgattgac
tgcccgctttgtccgcgtcttgcggcgttgcggaggtcgctgcgcgaggaacagcccggc
tggagcaacgcgcctgtccccacttttggcgacccttcggcgcccgtcctgattgtcggg
ctcgcgcccggcctgcgcggcgccaaccgcaccgggcgcccctttaccggcgattacgcg
ggcgatcttctttattcgactttgctggcctatggcttcgcgacgggcgtctatggcgcg
agccgcgacgacggcctcaggctgcgtgattgcgcgatcagcaacgccgtgcggtgcgtg
ccgccgcagaacaagccgacgcctgaggaaatcgcgacctgccggagctttctcaaagcg
acgcttgaacggtccgcccatctctccgtggtcgtcgcgctcggccggatcgcccatgag
tcgattctgcgggcgctgggggcgaagctatcggccttccctttcgcccatggcgcagag
cataagctcccgcgcgccaatgggcgcgatctggcgctgttcgatagctaccattgctcc
cgctacaacaccaatacgggcgtgctgacgccgcagatgtttgccgacgtgttcgccgcc
gtccgccgccgcgccgacgcaggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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