KEGG   Mycolicibacterium smegmatis MC2 155: MSMEG_0574
Entry
MSMEG_0574        CDS       T00434                                 
Name
(GenBank) putative ECF sigma factor RpoE1
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
msm  Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:msm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msm03021]
    MSMEG_0574
Transcription machinery [BR:msm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MSMEG_0574
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_23 Xre-like-HTH DUF758
Other DBs
NCBI-ProteinID: ABK72641
UniProt: A0QPZ6
Position
648080..648733
AA seq 217 aa
MKEFTPHRQWQERVMAVTAEAQVTDHGSSAERFERDALPLLDQLYGVARRYTRNQADAED
LVQETMVKAYGSFHTYRDGTNIRAWLFKILTNTWINAYHTAQRRPDVVVTDTISDAQLAA
VATRSETELASAELAALESMGDSEVRDAVAALPEHQRMAVYYADVVGMRYQEIADVLGVP
VGTVMSRLHRGRRRLREHLIGFAYQSGYLARPAGSAA
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaaagagttcacaccgcatcgacaatggcaggagcgggtcatggcagtgaccgctgag
gcacaagtgaccgaccacggcagcagcgccgagaggttcgaacgcgacgcactgccgctg
ctggaccagctctacggcgtcgcgcgccggtacacgcgcaatcaggccgacgccgaggac
ctggtgcaggagacgatggtcaaggcgtacggcagttttcacacgtatcgcgacggcacc
aacatcagggcatggctgttcaagatcctcacgaacacgtggatcaacgcctaccacacc
gcccagcgacgaccagatgtcgtggtcaccgacacgatcagtgacgcgcaactggccgcg
gtcgcgacgcggtcggagaccgaactggcctcggccgagttggcggcgctggagtccatg
ggggattcagaggtgcgcgacgcggtcgcggcgctgccggaacatcagcggatggccgtg
tactacgccgacgtggtcggcatgcggtaccaggagatcgccgatgtgctgggtgtcccc
gtgggaaccgtcatgtcccggttgcaccgtgggcgcaggcgtctgcgcgaacacctcatc
gggttcgcttaccagagtggctatctcgcccgcccggcgggcagcgcagcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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