KEGG   Mycolicibacterium smegmatis MC2 155: MSMEG_1418
Entry
MSMEG_1418        CDS       T00434                                 
Name
(GenBank) RNA polymerase ECF-type sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
msm  Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:msm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msm03021]
    MSMEG_1418
Transcription machinery [BR:msm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MSMEG_1418
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF
Other DBs
NCBI-ProteinID: ABK76201
UniProt: A0QSB3
Position
complement(1520922..1521446)
AA seq 174 aa
MSAETDAPRALLRLYDEALPVVYGYFVRRCGDRGTAEDLTSETFLAAMDAARKPSPPPMT
VPWLIGVARHKLADHYRRRHDRFSVPVAELPEPDDPADNWDAAVDRIVAEAVLARLPEQH
RTVLALRYMDDCSVPECAELIGRTVHATEALLVRARKAFRAQYPRDSQSEGGAP
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgagtgccgaaacagatgctccgcgggcactgctgaggctctacgacgaggccttgccg
gtggtgtacggatacttcgtccggcgctgcggtgaccgcgggaccgccgaggatctgacg
tctgagacgttcctcgcggccatggatgccgcgcgcaaaccgtcgccgccgcccatgacg
gtgccgtggctgatcggcgtggcacggcacaagctcgccgaccactaccgccgcaggcac
gaccggttcagcgttcccgtggcggaactgcccgaaccggacgacccggccgacaactgg
gacgccgccgtggaccgcatcgtcgccgaggctgtgctggcacggttacccgagcagcat
cgcaccgtactcgcgctgcgctacatggacgactgttcggtgcccgagtgcgccgagctc
atcggtcgcacagtgcacgccaccgaggcccttctagtacgggcccgcaaggcatttcga
gcgcagtacccacgggactcacagtcggaaggaggagcgccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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