KEGG   Mycolicibacterium smegmatis INHR1: LI99_13575
Entry
LI99_13575        CDS       T03409                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
msn  Mycolicibacterium smegmatis INHR1
Brite
KEGG Orthology (KO) [BR:msn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:msn03016]
    LI99_13575
Enzymes [BR:msn01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     LI99_13575
Transfer RNA biogenesis [BR:msn03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    LI99_13575
SSDB
Motif
Pfam: UPF0004 Radical_SAM B12-binding
Other DBs
NCBI-ProteinID: AIU14522
UniProt: A0A653FLN8
Position
2797397..2798935
AA seq 512 aa
MVTRDETAEAEGLRPAVGSSRVRTYQVRTYGCQMNVHDSERLSGLLESAGYQRAAEGTDA
DIVVFNTCAVRENADNKLYGNLSHLAPRKQADPNMQIAVGGCLAQKDRDAVLRRAPWVDV
VFGTHNIGSLPTLLERARHNREAQVEIVEALQEFPSALPASRESAYAAWVSISVGCNNTC
TFCIVPSLRGKEVDRRPGDILAEVQSLVDQGVLEITLLGQNVNAYGVSFADPELPRDRGA
FAKLLRACGGIDGLERVRFTSPHPAEFTDDVIEAMAATPNVCPTLHMPLQSGSDRILKAM
RRSYRAERFLGIIDKVRAAIPHAAITTDLIVGFPGETEEDFQATLDVVEQARFAGAFTFQ
YSKRPGTPAADMPDQLPKSVVTERYQRLIELQERISLEQNREQVGRAVELLVATGEGRKD
ASTARMSGRARDGRLVHFLPGDNEIRPGDIVTTTVTGAAPHHLIADAPIIERRRTRAGDA
HAAGQKPRTGVGLGMPRIGAPAPSATAEGCGC
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggtgaccagggacgagacagccgaggccgagggcctgcgacccgctgtcggctcgtcg
cgcgttcgcacctatcaggtccgcacgtacggctgtcagatgaatgtgcacgactccgag
cggctgtcggggctgctggaatccgccggctaccagcgtgcggccgaaggtaccgacgcc
gacatcgtggtgttcaacacgtgcgcggtacgtgagaacgccgacaacaagctgtacggg
aacctgagtcatctcgcaccgcgcaagcaggccgatccgaacatgcagatcgccgtgggc
ggatgcctcgcgcagaaagaccgtgacgcggtgctgcgccgcgccccctgggtggacgtc
gtcttcggcacccacaacatcgggtcgctgccgacgctgctcgagcgggcccggcacaac
cgcgaggcccaggtcgagatcgtcgaggccctgcaggagttcccgtcggcgctgcccgcc
tcacgcgaatccgcttacgcggcatgggtttccatctcggtcggctgcaacaacacgtgc
acgttctgcatcgtgccgtcgttgcgtggcaaggaggtcgaccgtcggccgggcgacatc
ctcgccgaggtgcagtcactcgtggaccagggcgtgctcgagatcacgctgctcggccag
aacgtcaacgcctacggggtctcgtttgccgacccggaactgccccgcgaccgcggcgcg
tttgccaagctgctgcgggcctgcggtggcatcgacggtctcgaacgtgtccgcttcact
tcgccgcacccggccgagttcaccgacgacgtgatcgaggccatggcggccacccccaat
gtgtgccccacgctgcacatgccgctgcagtcgggttccgaccgcatcctcaaggccatg
cggcgctcctaccgcgccgagcgcttcctcgggatcatcgacaaggtgcgcgcggccatc
ccgcacgcggccatcaccaccgatctcatcgtcggtttccccggcgagaccgaagaggac
ttccaggccacgctcgatgtcgtcgagcaggcgcggttcgccggcgcgttcacgttccag
tactccaagcggccgggcacgccggccgccgacatgcccgatcagttgcccaaatccgtt
gtgaccgagcggtatcaacgactgatcgagttgcaggagcgcatttcactggagcagaac
cgcgagcaggtcggccgcgcggtcgagcttctggtggccaccggcgagggacgcaaggat
gcgagcaccgcacgcatgtcgggccgggcccgcgatgggcgcctggtgcattttctgccc
ggggacaacgagatccggccgggtgacatcgtgaccaccaccgtcaccggggcggcgccg
caccacctgatcgccgacgccccgatcatcgagcgccgccgcacccgtgcgggcgacgcg
cacgcggcaggccagaaaccccgcaccggtgtgggtctcggcatgccgcgcatcggcgcg
cccgcgccgagtgcgacggcagaagggtgtggctgttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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