KEGG   Mycolicibacterium gilvum Spyr1: Mspyr1_48000
Entry
Mspyr1_48000      CDS       T01376                                 
Name
(GenBank) endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
msp  Mycolicibacterium gilvum Spyr1
Pathway
msp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mspyr1_48000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msp03400]
    Mspyr1_48000
Enzymes [BR:msp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mspyr1_48000
DNA repair and recombination proteins [BR:msp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Mspyr1_48000
 Prokaryotic type
     Mspyr1_48000
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: ADU01341
UniProt: E6TIL3
Position
complement(4986582..4987364)
AA seq 260 aa
MTVSEPSTGAKSARRSARKWDRETHLGLVRRARRMNRTLAQAFPHVYCELDFTNPLELTV
ATILSAQSTDKRVNLTTPALFAKYRTARDYATADRTELEELIRPTGFYRNKATSLIGLGQ
ALEERFDGEVPRTLDELVTLPGIGRKTANVVLGNAFDIPGITVDTHFGRLVRRWRWTAEE
DPVKVEHIVGDLIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGTGPTDPL
IAAALVKGPETEHLLALAGL
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgaccgtgagtgagccctccaccggtgccaagtctgcgcgccggtcggcccgcaagtgg
gacagggaaacgcacctgggcctcgtccgccgggcccgccggatgaatcgcactctggcc
caggccttcccgcacgtctactgcgagttggacttcaccaaccccctcgagctcaccgtc
gcgaccatcctgtcggcgcagagcactgacaagcgggtcaacctcaccacccccgccctg
ttcgcgaagtaccgcaccgcacgcgactacgcgaccgccgaccgcaccgaactcgaagag
ctgatccggcccaccggcttctaccggaacaaggccacgtcgctgatcgggctggggcag
gcgctggaggagcgtttcgacggcgaggtgccccggacgctggacgaactcgtcacgctg
ccgggtatcggacgcaagaccgcgaacgtggtcctgggcaacgccttcgacattcccggc
atcaccgtcgacacccatttcggccggctcgtccggcgctggcggtggaccgcggaggaa
gacccggtgaaggtcgagcacatcgtcggcgatctgatcgaacgcagcgaatggacgctg
ctcagccaccgggtgatcttccacggccggcgggtctgccacgcccgcaagccggcctgc
ggggtgtgcgtcctcgccaaggactgcccgtcctacggcacaggtcccaccgatccgttg
atcgccgctgcgctggtgaaaggtcccgagaccgagcatctgctggcgctggccgggctc
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system