KEGG   Mannheimia succiniciproducens: MS2273
Entry
MS2273            CDS       T00201                                 
Name
(GenBank) unknown
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
msu  Mannheimia succiniciproducens
Brite
KEGG Orthology (KO) [BR:msu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:msu03016]
    MS2273
Enzymes [BR:msu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     MS2273
Transfer RNA biogenesis [BR:msu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MS2273
 Prokaryotic type
    MS2273
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AAU38880
UniProt: Q65Q80
Position
complement(2202906..2203919)
AA seq 337 aa
MLELAYLQTLPQQRALLKADYADFIVKEDLGYAMTGEGEFVALYVRKTDANTLFVGEQLA
KFVGLSPRNMGYAGLKDRKAVTEQWFCLQMPGKAMPDFSRFNMAGVEILQVTRHSRKIRT
GSLNGNHFEILLRNAVETDELKVRLENIKNFGFPNYFTEQRFGKDGHNLTQAMRWANGEI
KVKDRKKRSFYLSAARSEVFNLVVSERIRQGLANQVLAHDILQLAGTHSWFTADGKEDLA
LLQTRLENHDLQLTAPLIGETQQLACELENKLVERHQSLISLMKRERMKPARRPLLMQAR
DFHWEFVENGLKLKFYLPAGSYATALVRELVNIDENE
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgttagaacttgcttacttgcaaacgttgcctcaacagcgcgcgctgttaaaagccgac
tatgccgattttatcgtgaaagaagatttgggttatgccatgaccggcgaaggggaattt
gttgcgctatatgtgcgcaaaaccgatgcaaatacgttgtttgtcggtgaacagttggcg
aaatttgtcggactttcccctcgcaatatgggttatgccggtctgaaagaccgtaaagcc
gtgacggaacaatggttctgcttgcaaatgccgggcaaagcgatgccggatttcagccgc
tttaatatggcgggcgtagaaatcttacaagtaacccgccacagcagaaagattcgcacg
ggtagtttgaacggtaatcattttgaaattttattgcgtaatgccgtcgaaaccgacgag
ttaaaagtgcggttggaaaatatcaaaaattttggttttccgaattattttacggaacaa
cgcttcggtaaagacggtcataatcttacgcaggcaatgcgttgggcgaacggcgagatt
aaggtcaaagaccgcaaaaagcgcagtttttatttgtctgcggcgcgcagtgaagtgttt
aatctggtggtttcggagcgaatccgtcaaggcctggcaaatcaagtattagcccatgat
attcttcagttagcgggcacacacagttggtttacggcggatggaaaagaggatttggct
cttttgcagacgcgtttagagaatcatgatttacagcttaccgcccctttaatcggcgaa
actcagcaacttgcctgcgagctggaaaataaactggttgagcggcatcagtcgcttatc
agcctgatgaaacgggaacgtatgaagccggctcggcgtccgttgctgatgcaggcacgg
gattttcactgggaatttgtggaaaacggtttaaaactcaagttctatttacctgccggc
agttatgctaccgcattggtgcgggaattagtaaatattgatgaaaatgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system